Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625505
Identifier: 84625505
GI number: 84625505
Start: 4352265
End: 4352855
Strand: Reverse
Name: 84625505
Synonym: XOO_3848
Alternate gene names: NA
Gene position: 4352855-4352265 (Counterclockwise)
Preceding gene: 84625506
Following gene: 84625503
Centisome position: 88.11
GC content: 64.47
Gene sequence:
>591_bases ATGCCGATCAAACCCATTGTGTGTGGCCTGCTGCTGATGGTTCTGTTGAGCGCCTGCGGGCAGACCAGCAGCCCGCAGGA AGCGCCAAAGCCGTTGGATACGTCGATGCAGAAGCCGCCCAGCGCCGATCCCAGCCAGCCGGTGTCCTCTGGCAATACGC CGACCGCTGCCGATATCGCCGCCGCCGCCGCACTCAATGCGCAGTACGACCCCTCGCGCGATCCGGCCGCCGATCTGGAG ACGGCCAAGGTCGAAGCCAAGCGTGGCGGCAAACGTATCGTAATCAATGTCGGCAGTGCGGCCTGCGAGCCCTGCAAGGC GCTGGATGAACTGATGGGAGGCGACGCCGAGCTACGCAGCTTCCGCGACGCGCACTTCGTGGTGGTCAAGGTCAATCGCG ATGCGGCCAACGAGAACACCGCCTTCCTGTCGGCGTTCGCCCAGCTCAACGACTCCCCGTCGCTGCTGGTGTTGGATAAC GACGGCAAGCTGCTGACCACCCAGTCTGGCCCGGAGCTGCGCAAGGGCGAGGGCTTCGATCGTAAGAAGCTGTTCGATTT TCTCAAGCAGTGGGCGCCGCCGCAGGCCTGA
Upstream 100 bases:
>100_bases CTTTTGGTTTCTGGTCGTTGATCGCTGCGGGTGTGTTGCTGCTGCTGATTGCCCCGTTGGTCAACAAACTGATGCACGGT GTGAAGTGAGGAGACAAGCA
Downstream 100 bases:
>100_bases CGTCCCACGGATGTGCGACACGAAAAACCCCCGCAGCGATGCGGGGGTTTTCTGTTTACATCGTGCCGATGCGCATCGCC TGGCACGCGGGCGACGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPIKPIVCGLLLMVLLSACGQTSSPQEAPKPLDTSMQKPPSADPSQPVSSGNTPTAADIAAAAALNAQYDPSRDPAADLE TAKVEAKRGGKRIVINVGSAACEPCKALDELMGGDAELRSFRDAHFVVVKVNRDAANENTAFLSAFAQLNDSPSLLVLDN DGKLLTTQSGPELRKGEGFDRKKLFDFLKQWAPPQA
Sequences:
>Translated_196_residues MPIKPIVCGLLLMVLLSACGQTSSPQEAPKPLDTSMQKPPSADPSQPVSSGNTPTAADIAAAAALNAQYDPSRDPAADLE TAKVEAKRGGKRIVINVGSAACEPCKALDELMGGDAELRSFRDAHFVVVKVNRDAANENTAFLSAFAQLNDSPSLLVLDN DGKLLTTQSGPELRKGEGFDRKKLFDFLKQWAPPQA >Mature_195_residues PIKPIVCGLLLMVLLSACGQTSSPQEAPKPLDTSMQKPPSADPSQPVSSGNTPTAADIAAAAALNAQYDPSRDPAADLET AKVEAKRGGKRIVINVGSAACEPCKALDELMGGDAELRSFRDAHFVVVKVNRDAANENTAFLSAFAQLNDSPSLLVLDND GKLLTTQSGPELRKGEGFDRKKLFDFLKQWAPPQA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20745; Mature: 20614
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKPIVCGLLLMVLLSACGQTSSPQEAPKPLDTSMQKPPSADPSQPVSSGNTPTAADIA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AAAALNAQYDPSRDPAADLETAKVEAKRGGKRIVINVGSAACEPCKALDELMGGDAELRS HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHH FRDAHFVVVKVNRDAANENTAFLSAFAQLNDSPSLLVLDNDGKLLTTQSGPELRKGEGFD CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCC RKKLFDFLKQWAPPQA HHHHHHHHHHCCCCCC >Mature Secondary Structure PIKPIVCGLLLMVLLSACGQTSSPQEAPKPLDTSMQKPPSADPSQPVSSGNTPTAADIA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AAAALNAQYDPSRDPAADLETAKVEAKRGGKRIVINVGSAACEPCKALDELMGGDAELRS HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHH FRDAHFVVVKVNRDAANENTAFLSAFAQLNDSPSLLVLDNDGKLLTTQSGPELRKGEGFD CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCC RKKLFDFLKQWAPPQA HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA