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The map label for this gene is vllY [H]

Identifier: 84625503

GI number: 84625503

Start: 4350179

End: 4351249

Strand: Reverse

Name: vllY [H]

Synonym: XOO_3846

Alternate gene names: 84625503

Gene position: 4351249-4350179 (Counterclockwise)

Preceding gene: 84625505

Following gene: 84625502

Centisome position: 88.08

GC content: 61.25

Gene sequence:

>1071_bases
ATGCAGGTCACCACCTTCGACAATCCGATGGGCATCGACGGCTTCGAGTTCGTCGAATTCGCCGCACCGGCCGGCCAGGC
AGTGAAGTTGCACGACTATTTCCGCAAGATGGGCTTCAGCGCGGTGCTGCGTCACCGTAGTCGCCTCATTACCGTCTATC
GCCAGGGCGGGGTCAACTTCCTGCTCAACGAAGACCCCGATTCGTTCGCCGCCGACTTCGCCGCTGCGCATGGTCCGTGC
GCTTGCGGCTTCGCGATTCGCTTCCGCACCCCGGCCGAGACCGTGCTGCAGACCGTGCTGGGCAACGGCGGCGAAGCGGT
GCAGGACAAGGCCGACACCCGCGCGGTGCCGGCGCCGGTGGTCAAGGGCATCGGCGATTGCATGCTGCATCTGGTGGACC
GCTACGGCGACGCCGGCAGCATCTACGACGCTGATTTCGAGCCCATCGACGGTGCCGACCAGCATCCGACCGGCTTCGGG
CTGACCTTCATCGACCACCTCACCCATAACCTGTATTTCGGCAACATGCAGCGCTGGTCGGATTACTACGAGCGCCTGTT
CAACTTCCGCGAGATTCGCTACTTCGACATCAAGGGCGCCAAGACCGGCCTGGTGTCCAAGGCGATGACTGCGCCGGACG
GCATCGTGCGGATTCCGCTCAACGAATCGTCCGACCCCAAGAGCCAGATCAACGAGTATCTGGACGCCTACCAGGGTGAA
GGTATCCAGCACATCGCCTGCTTCACCGAGGACATCTACACCAGCGTGGAAAAAATGCGCGCCGCTGGCGTGAGCTTTCT
GGACACGCCGGACACGTATTTCGATGTGGTGGACCTGCGCATTCCCGACCACGGCGAAGATGTCGAACGCCTGCGTCGCA
ACAAGATCCTGATCGACGCCGACCCGGATACCAAACAGCGCAAGCTGCTGCAGATCTTCACCACCAACTGCATCGGCCCG
ATCTTCTTCGAGATCATCCAGCGCAAGGGTAATGAAGGTTTCGGCGAAGGCAATTTCCAGGCGCTGTTCGAAAGCATCGA
GCGCGATCAGATCAAGCGTGGGGTGCTTTGA

Upstream 100 bases:

>100_bases
TCTTCTGTTAGTCCGCATAGCCCTGTGGCTCCCCCCGCAGCGTGGAGAAACGACGATGAGCGCACTACCGAACACCACTG
CAACCCGCCCGGATCCGGGC

Downstream 100 bases:

>100_bases
GGGCGGGGATCGGTGATTCGTTATTCGGGATTGGTGTCAGGCGCCCGTTGACACGTGGTGACCTGGTATTGCGTGTGATG
CCGAACGTCGCAGCCAGAAT

Product: 4-hydroxyphenylpyruvate dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MQVTTFDNPMGIDGFEFVEFAAPAGQAVKLHDYFRKMGFSAVLRHRSRLITVYRQGGVNFLLNEDPDSFAADFAAAHGPC
ACGFAIRFRTPAETVLQTVLGNGGEAVQDKADTRAVPAPVVKGIGDCMLHLVDRYGDAGSIYDADFEPIDGADQHPTGFG
LTFIDHLTHNLYFGNMQRWSDYYERLFNFREIRYFDIKGAKTGLVSKAMTAPDGIVRIPLNESSDPKSQINEYLDAYQGE
GIQHIACFTEDIYTSVEKMRAAGVSFLDTPDTYFDVVDLRIPDHGEDVERLRRNKILIDADPDTKQRKLLQIFTTNCIGP
IFFEIIQRKGNEGFGEGNFQALFESIERDQIKRGVL

Sequences:

>Translated_356_residues
MQVTTFDNPMGIDGFEFVEFAAPAGQAVKLHDYFRKMGFSAVLRHRSRLITVYRQGGVNFLLNEDPDSFAADFAAAHGPC
ACGFAIRFRTPAETVLQTVLGNGGEAVQDKADTRAVPAPVVKGIGDCMLHLVDRYGDAGSIYDADFEPIDGADQHPTGFG
LTFIDHLTHNLYFGNMQRWSDYYERLFNFREIRYFDIKGAKTGLVSKAMTAPDGIVRIPLNESSDPKSQINEYLDAYQGE
GIQHIACFTEDIYTSVEKMRAAGVSFLDTPDTYFDVVDLRIPDHGEDVERLRRNKILIDADPDTKQRKLLQIFTTNCIGP
IFFEIIQRKGNEGFGEGNFQALFESIERDQIKRGVL
>Mature_356_residues
MQVTTFDNPMGIDGFEFVEFAAPAGQAVKLHDYFRKMGFSAVLRHRSRLITVYRQGGVNFLLNEDPDSFAADFAAAHGPC
ACGFAIRFRTPAETVLQTVLGNGGEAVQDKADTRAVPAPVVKGIGDCMLHLVDRYGDAGSIYDADFEPIDGADQHPTGFG
LTFIDHLTHNLYFGNMQRWSDYYERLFNFREIRYFDIKGAKTGLVSKAMTAPDGIVRIPLNESSDPKSQINEYLDAYQGE
GIQHIACFTEDIYTSVEKMRAAGVSFLDTPDTYFDVVDLRIPDHGEDVERLRRNKILIDADPDTKQRKLLQIFTTNCIGP
IFFEIIQRKGNEGFGEGNFQALFESIERDQIKRGVL

Specific function: Unknown

COG id: COG3185

COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4HPPD family [H]

Homologues:

Organism=Homo sapiens, GI4504477, Length=350, Percent_Identity=28.2857142857143, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI285002264, Length=331, Percent_Identity=27.7945619335347, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI14249394, Length=377, Percent_Identity=26.525198938992, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17555220, Length=210, Percent_Identity=41.4285714285714, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17550752, Length=227, Percent_Identity=33.920704845815, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24667510, Length=285, Percent_Identity=34.7368421052632, Blast_Score=137, Evalue=9e-33,
Organism=Drosophila melanogaster, GI21356105, Length=285, Percent_Identity=34.7368421052632, Blast_Score=137, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005956
- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 39895; Mature: 39895

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVTTFDNPMGIDGFEFVEFAAPAGQAVKLHDYFRKMGFSAVLRHRSRLITVYRQGGVNF
CEEECCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEECCCCEE
LLNEDPDSFAADFAAAHGPCACGFAIRFRTPAETVLQTVLGNGGEAVQDKADTRAVPAPV
EECCCCHHHHHHHHHCCCCEEECEEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCCCHHH
VKGIGDCMLHLVDRYGDAGSIYDADFEPIDGADQHPTGFGLTFIDHLTHNLYFGNMQRWS
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCHHHHH
DYYERLFNFREIRYFDIKGAKTGLVSKAMTAPDGIVRIPLNESSDPKSQINEYLDAYQGE
HHHHHHHCHHHEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
GIQHIACFTEDIYTSVEKMRAAGVSFLDTPDTYFDVVDLRIPDHGEDVERLRRNKILIDA
CCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCEEEEC
DPDTKQRKLLQIFTTNCIGPIFFEIIQRKGNEGFGEGNFQALFESIERDQIKRGVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVTTFDNPMGIDGFEFVEFAAPAGQAVKLHDYFRKMGFSAVLRHRSRLITVYRQGGVNF
CEEECCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEECCCCEE
LLNEDPDSFAADFAAAHGPCACGFAIRFRTPAETVLQTVLGNGGEAVQDKADTRAVPAPV
EECCCCHHHHHHHHHCCCCEEECEEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCCCHHH
VKGIGDCMLHLVDRYGDAGSIYDADFEPIDGADQHPTGFGLTFIDHLTHNLYFGNMQRWS
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCHHHHH
DYYERLFNFREIRYFDIKGAKTGLVSKAMTAPDGIVRIPLNESSDPKSQINEYLDAYQGE
HHHHHHHCHHHEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
GIQHIACFTEDIYTSVEKMRAAGVSFLDTPDTYFDVVDLRIPDHGEDVERLRRNKILIDA
CCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCEEEEC
DPDTKQRKLLQIFTTNCIGPIFFEIIQRKGNEGFGEGNFQALFESIERDQIKRGVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA