Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625477
Identifier: 84625477
GI number: 84625477
Start: 4325658
End: 4326281
Strand: Reverse
Name: 84625477
Synonym: XOO_3820
Alternate gene names: NA
Gene position: 4326281-4325658 (Counterclockwise)
Preceding gene: 84625478
Following gene: 84625474
Centisome position: 87.57
GC content: 58.17
Gene sequence:
>624_bases ATGTTCGATGGAACTGTGGAGGCTGTGTTGAACGTGATGATTCAATTGCTCGTTGTGTCATTGGCTGTTGCGTGTGCCGC CCCCGTACTGGCTGCCGAACAAACGCATGCGCAGATCGATGGCACGGGTGCACGCATCCGGATGTTTGGTCAGAACGGCG TGGGAATCGTGTTGTACAAGGACGCTGTGTGTACCGCCACTTATGGCGAGAAGGTGCGTGCGTCCGGTTCGTTGGGCAGT GCGTTCGGATCGCTGATGGGGTCTGTGAAGAATCAGGCGATCGGCATTCCGGAGACCCAGAACACGCGCAACCTGCATGA GCGCAAGATGATCGGTTCAAAGCCGTTCTACAAGGAATATGCGATCGAAGCTGGCAAGCCGGTGGTGGTAGAGGCTGGTG CCAGTTCGCCGGCATATTGGACCAGCACGCCGGGCTTCAAAAGCGGTTGGACATGCGGGCCGTTGCTGGCGTCCACCTTT GTACCGGAGGCCGGTGCCGATTACGAGGTTGCGTTGGACCTGGACTTTCGCAACTCGCTCTGCACCTTGGCGGTCAAGCG GGTTGCCGCTGATGGACAGGTGACTCCTGTCGATGTGGCACCCGTCTCCAAAGACTGCAAATAG
Upstream 100 bases:
>100_bases AGATGTGATGCCTTCGGTGATATGCACCTCACGTTGGACGCGGGACTTGCCTTGGAGTTCAAGAATTCACACAACTTACC GCTAATCCAAGCTCACCGGG
Downstream 100 bases:
>100_bases TCTGTAGCGTTGCATCCGCGTAGGATATGGCTAGCGAACGATGTGGAGACCAACGACTAGACGTTGGCCTGCACGATTGC AGCACGCAGGCAAAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MFDGTVEAVLNVMIQLLVVSLAVACAAPVLAAEQTHAQIDGTGARIRMFGQNGVGIVLYKDAVCTATYGEKVRASGSLGS AFGSLMGSVKNQAIGIPETQNTRNLHERKMIGSKPFYKEYAIEAGKPVVVEAGASSPAYWTSTPGFKSGWTCGPLLASTF VPEAGADYEVALDLDFRNSLCTLAVKRVAADGQVTPVDVAPVSKDCK
Sequences:
>Translated_207_residues MFDGTVEAVLNVMIQLLVVSLAVACAAPVLAAEQTHAQIDGTGARIRMFGQNGVGIVLYKDAVCTATYGEKVRASGSLGS AFGSLMGSVKNQAIGIPETQNTRNLHERKMIGSKPFYKEYAIEAGKPVVVEAGASSPAYWTSTPGFKSGWTCGPLLASTF VPEAGADYEVALDLDFRNSLCTLAVKRVAADGQVTPVDVAPVSKDCK >Mature_207_residues MFDGTVEAVLNVMIQLLVVSLAVACAAPVLAAEQTHAQIDGTGARIRMFGQNGVGIVLYKDAVCTATYGEKVRASGSLGS AFGSLMGSVKNQAIGIPETQNTRNLHERKMIGSKPFYKEYAIEAGKPVVVEAGASSPAYWTSTPGFKSGWTCGPLLASTF VPEAGADYEVALDLDFRNSLCTLAVKRVAADGQVTPVDVAPVSKDCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21705; Mature: 21705
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDGTVEAVLNVMIQLLVVSLAVACAAPVLAAEQTHAQIDGTGARIRMFGQNGVGIVLYK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEECCCCCEEEEEC DAVCTATYGEKVRASGSLGSAFGSLMGSVKNQAIGIPETQNTRNLHERKMIGSKPFYKEY CCEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHH AIEAGKPVVVEAGASSPAYWTSTPGFKSGWTCGPLLASTFVPEAGADYEVALDLDFRNSL HHCCCCEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHH CTLAVKRVAADGQVTPVDVAPVSKDCK HHHHHHHHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure MFDGTVEAVLNVMIQLLVVSLAVACAAPVLAAEQTHAQIDGTGARIRMFGQNGVGIVLYK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEECCCCCEEEEEC DAVCTATYGEKVRASGSLGSAFGSLMGSVKNQAIGIPETQNTRNLHERKMIGSKPFYKEY CCEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHH AIEAGKPVVVEAGASSPAYWTSTPGFKSGWTCGPLLASTFVPEAGADYEVALDLDFRNSL HHCCCCEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHH CTLAVKRVAADGQVTPVDVAPVSKDCK HHHHHHHHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA