Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625375
Identifier: 84625375
GI number: 84625375
Start: 4203126
End: 4204535
Strand: Reverse
Name: 84625375
Synonym: XOO_3718
Alternate gene names: NA
Gene position: 4204535-4203126 (Counterclockwise)
Preceding gene: 84625376
Following gene: 84625374
Centisome position: 85.11
GC content: 64.89
Gene sequence:
>1410_bases ATGTCATCGATGAGTTCTGCCCACGCGCAAGGCGGCGCATTGTTGCTGCGATCAATCTCTGCTCTGAGGTCGATGTGGTG TGCGGGCAGGCGCAGATGTGCTGCGGTGGTATGTGTCAGCGCCTTTCTCGCGGTGCAGCTGCTGCAGGTAGCGGGTGCTG CGCCGAGCGAGACCGCAAACGCGGCGAGCGCAGAGTGTGTGGAAGCACTGCTGCGCCGGTTGGGCTGGACCATTCATCGC GCCGCGGTGAGCGCGCCGGTACTACAGCGGGGCGAGCCGTGCACGCGTGGCACGCTTGCACAGGCGCAGGCCGCCGGCGA TCTGCAGCTGACGCTTCCGGCCGACTGGAACACAGACCAGCGCGGCGCAGCGCTCACCGCCGTGCTGGACGATGCGGCCA CGCACTGCGCCTACGCGTTCGAACTCGGTGCAGCGACCCGCCGCGCGGTAACGCAGTTGCAGAACAACTCGCACTACCGG TTCTCGGCGGTGCAACTGGGCTGGATCGGATTTGGCTGGCGTGGTGCAGCGGCCCAGGGCTGGCGTGGTTTTCGCAGTTT CGGTCGCGGGTATCAGCCGCGCAGCAGCAATGCGCAGGCATTGGATGCGTTCTACCGCGGGCAGGTGCGCTCCGAATGCG GCGTGGGCCGGCAAGTAGCGCAGCTCGCCACACAGCGTGAGCTGTTCGGCGATGCCGGGTTCAATGAAGCGTTTACGCCT GGCGAACTCTCGATCGGCACATTTCTGACCTTGCACGACACCGACAGCATTCTGCTCGGTGCGCATGCCGGCGAATTTTT CGCCGACGGCAAGGCGGTGCAGACCTCGCAACTCGGGCGGCAAGCGTTCGTCGGCGCGCCGGGGTTCATTGCGCACGTAT TCGACAAGTCCTATCTGGATGACATCCACAATCAGGCGGAAAATTTCGTGGTAGTGGACGTCAGCGACGCAGCCGCGCAA GCGCTGGCGCAGCACGGTGGCTTTGCGTATTACGACGCGCGCAACCGGCAGATCTGGGAGCTGGCCAAACAGCTGCGCGG GCCGGGCAAGCGCCGCTTCGAGAGGTTGCTTTACGAGCGCGATGCAGCGTTGCGCGCCACGCTCGACCCGCAGCAGCAGA CCCAGCTGCGGCAACTGCAAACGCTGCTGGACGACCCGTTCTATCAAGGCTTTTCAGTCTATGTGCATCCCAAGGGCACC AAGCCGATCGGCTATCACGTGGCGCGCCTGCTCGACCGTAACCCGCGCACCCCGTATGCCATCGACCTGACCTTGCACAA TCTGCGCACCACCTTGTACTGGCGGTGGATCGACTGGCAGCTGCAGCGATGCGGCGCCGCGACCGCAGCGGAACAATCCA TTGAGAATTCCGCCACGCCAGCGTACGCCGGGCGTGGCACCCTGCACTGA
Upstream 100 bases:
>100_bases AGCCTGGCGAAGTGATTGGTCTGAACTGAGTTGCGAGCCCCGGCCATGCCGGGGCTTTCTACGTCTGAGGATGCGGCGCC GTGCCGACGAGTGATTGCGC
Downstream 100 bases:
>100_bases TCAACGCATGAGGAGCGATTATGGAACTGGGTATGGTGGGACTGGGCCGCATGGGCGCCAATATGGCCGAGCGCCTGATC AACGGCGGGCATCGCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSSMSSAHAQGGALLLRSISALRSMWCAGRRRCAAVVCVSAFLAVQLLQVAGAAPSETANAASAECVEALLRRLGWTIHR AAVSAPVLQRGEPCTRGTLAQAQAAGDLQLTLPADWNTDQRGAALTAVLDDAATHCAYAFELGAATRRAVTQLQNNSHYR FSAVQLGWIGFGWRGAAAQGWRGFRSFGRGYQPRSSNAQALDAFYRGQVRSECGVGRQVAQLATQRELFGDAGFNEAFTP GELSIGTFLTLHDTDSILLGAHAGEFFADGKAVQTSQLGRQAFVGAPGFIAHVFDKSYLDDIHNQAENFVVVDVSDAAAQ ALAQHGGFAYYDARNRQIWELAKQLRGPGKRRFERLLYERDAALRATLDPQQQTQLRQLQTLLDDPFYQGFSVYVHPKGT KPIGYHVARLLDRNPRTPYAIDLTLHNLRTTLYWRWIDWQLQRCGAATAAEQSIENSATPAYAGRGTLH
Sequences:
>Translated_469_residues MSSMSSAHAQGGALLLRSISALRSMWCAGRRRCAAVVCVSAFLAVQLLQVAGAAPSETANAASAECVEALLRRLGWTIHR AAVSAPVLQRGEPCTRGTLAQAQAAGDLQLTLPADWNTDQRGAALTAVLDDAATHCAYAFELGAATRRAVTQLQNNSHYR FSAVQLGWIGFGWRGAAAQGWRGFRSFGRGYQPRSSNAQALDAFYRGQVRSECGVGRQVAQLATQRELFGDAGFNEAFTP GELSIGTFLTLHDTDSILLGAHAGEFFADGKAVQTSQLGRQAFVGAPGFIAHVFDKSYLDDIHNQAENFVVVDVSDAAAQ ALAQHGGFAYYDARNRQIWELAKQLRGPGKRRFERLLYERDAALRATLDPQQQTQLRQLQTLLDDPFYQGFSVYVHPKGT KPIGYHVARLLDRNPRTPYAIDLTLHNLRTTLYWRWIDWQLQRCGAATAAEQSIENSATPAYAGRGTLH >Mature_468_residues SSMSSAHAQGGALLLRSISALRSMWCAGRRRCAAVVCVSAFLAVQLLQVAGAAPSETANAASAECVEALLRRLGWTIHRA AVSAPVLQRGEPCTRGTLAQAQAAGDLQLTLPADWNTDQRGAALTAVLDDAATHCAYAFELGAATRRAVTQLQNNSHYRF SAVQLGWIGFGWRGAAAQGWRGFRSFGRGYQPRSSNAQALDAFYRGQVRSECGVGRQVAQLATQRELFGDAGFNEAFTPG ELSIGTFLTLHDTDSILLGAHAGEFFADGKAVQTSQLGRQAFVGAPGFIAHVFDKSYLDDIHNQAENFVVVDVSDAAAQA LAQHGGFAYYDARNRQIWELAKQLRGPGKRRFERLLYERDAALRATLDPQQQTQLRQLQTLLDDPFYQGFSVYVHPKGTK PIGYHVARLLDRNPRTPYAIDLTLHNLRTTLYWRWIDWQLQRCGAATAAEQSIENSATPAYAGRGTLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51213; Mature: 51082
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMSSAHAQGGALLLRSISALRSMWCAGRRRCAAVVCVSAFLAVQLLQVAGAAPSETAN CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AASAECVEALLRRLGWTIHRAAVSAPVLQRGEPCTRGTLAQAQAAGDLQLTLPADWNTDQ CHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCC RGAALTAVLDDAATHCAYAFELGAATRRAVTQLQNNSHYRFSAVQLGWIGFGWRGAAAQG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHH WRGFRSFGRGYQPRSSNAQALDAFYRGQVRSECGVGRQVAQLATQRELFGDAGFNEAFTP HHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC GELSIGTFLTLHDTDSILLGAHAGEFFADGKAVQTSQLGRQAFVGAPGFIAHVFDKSYLD CCEEECEEEEEECCCCEEEECCCCCHHCCCCCHHHHHHCHHHHCCCCHHHHHHHHHHHHH DIHNQAENFVVVDVSDAAAQALAQHGGFAYYDARNRQIWELAKQLRGPGKRRFERLLYER HHHHCCCCEEEEEECHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHH DAALRATLDPQQQTQLRQLQTLLDDPFYQGFSVYVHPKGTKPIGYHVARLLDRNPRTPYA CCHHEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEE IDLTLHNLRTTLYWRWIDWQLQRCGAATAAEQSIENSATPAYAGRGTLH EEEEEEHHEEEEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSMSSAHAQGGALLLRSISALRSMWCAGRRRCAAVVCVSAFLAVQLLQVAGAAPSETAN CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AASAECVEALLRRLGWTIHRAAVSAPVLQRGEPCTRGTLAQAQAAGDLQLTLPADWNTDQ CHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCC RGAALTAVLDDAATHCAYAFELGAATRRAVTQLQNNSHYRFSAVQLGWIGFGWRGAAAQG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHH WRGFRSFGRGYQPRSSNAQALDAFYRGQVRSECGVGRQVAQLATQRELFGDAGFNEAFTP HHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC GELSIGTFLTLHDTDSILLGAHAGEFFADGKAVQTSQLGRQAFVGAPGFIAHVFDKSYLD CCEEECEEEEEECCCCEEEECCCCCHHCCCCCHHHHHHCHHHHCCCCHHHHHHHHHHHHH DIHNQAENFVVVDVSDAAAQALAQHGGFAYYDARNRQIWELAKQLRGPGKRRFERLLYER HHHHCCCCEEEEEECHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHH DAALRATLDPQQQTQLRQLQTLLDDPFYQGFSVYVHPKGTKPIGYHVARLLDRNPRTPYA CCHHEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEE IDLTLHNLRTTLYWRWIDWQLQRCGAATAAEQSIENSATPAYAGRGTLH EEEEEEHHEEEEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA