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The map label for this gene is ybaB [C]

Identifier: 84622622

GI number: 84622622

Start: 1055466

End: 1055786

Strand: Direct

Name: ybaB [C]

Synonym: XOO_0965

Alternate gene names: 84622622

Gene position: 1055466-1055786 (Clockwise)

Preceding gene: 84622621

Following gene: 84622623

Centisome position: 21.36

GC content: 62.93

Gene sequence:

>321_bases
ATGCGTGGAAACATTGCCCAACTGATGCAGCAGGCGCAGAAGATGCAGGAAAACCTGCAGCGCGCCCAGGAAGAACTGGC
CAAGCTGGAAGTCACCGGCACTGCCGGCGGCGGCATGGTCAACGTGACGCTGACCGGCGCCAAGGAGTGCCGCAAGGTGC
GGATCGATCCGAGCATCCTCTCCGACCAGGAGATGGCCGAGGACCTGATCGCTGCCGCCTTCAACGACGCCTCCAACAAG
ATCGACGCCGAATCCAAGGACCGCATGGGTTCGGCCACTGCCGGCATGCAGTTGCCGCCGGGCATGAAGTTGCCGTTCTG
A

Upstream 100 bases:

>100_bases
AACAGCCTTTATGAACGACCCGACGGTGCAGCTGCTGATCCAGCAGCAAGGCGCGCGGATCGTCCCCGATTCCATCCGCC
CTTACGACGAGTAACGCCCC

Downstream 100 bases:

>100_bases
GCGAAGGGATTCGGGAGTCGGGATTTGGGATGAGCTAAGTGCAAAGGCCTTTGCCGTTGCGAATTCCAAATCCCGAATTT
CCAATCCCGGCCACCCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRGNIAQLMQQAQKMQENLQRAQEELAKLEVTGTAGGGMVNVTLTGAKECRKVRIDPSILSDQEMAEDLIAAAFNDASNK
IDAESKDRMGSATAGMQLPPGMKLPF

Sequences:

>Translated_106_residues
MRGNIAQLMQQAQKMQENLQRAQEELAKLEVTGTAGGGMVNVTLTGAKECRKVRIDPSILSDQEMAEDLIAAAFNDASNK
IDAESKDRMGSATAGMQLPPGMKLPF
>Mature_106_residues
MRGNIAQLMQQAQKMQENLQRAQEELAKLEVTGTAGGGMVNVTLTGAKECRKVRIDPSILSDQEMAEDLIAAAFNDASNK
IDAESKDRMGSATAGMQLPPGMKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=106, Percent_Identity=57.5471698113208, Blast_Score=135, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1065_XANOR (Q5H402)

Other databases:

- EMBL:   AE013598
- RefSeq:   YP_199704.1
- HSSP:   P0A8B5
- ProteinModelPortal:   Q5H402
- SMR:   Q5H402
- GeneID:   3264989
- GenomeReviews:   AE013598_GR
- KEGG:   xoo:XOO1065
- NMPDR:   fig|291331.3.peg.1065
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- BioCyc:   XORY291331:XOO1065-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11409; Mature: 11409

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGNIAQLMQQAQKMQENLQRAQEELAKLEVTGTAGGGMVNVTLTGAKECRKVRIDPSIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCHHHHHEECCCHHHC
SDQEMAEDLIAAAFNDASNKIDAESKDRMGSATAGMQLPPGMKLPF
CHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGNIAQLMQQAQKMQENLQRAQEELAKLEVTGTAGGGMVNVTLTGAKECRKVRIDPSIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCHHHHHEECCCHHHC
SDQEMAEDLIAAAFNDASNKIDAESKDRMGSATAGMQLPPGMKLPF
CHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA