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The map label for this gene is recR [H]

Identifier: 84622623

GI number: 84622623

Start: 1055884

End: 1056477

Strand: Direct

Name: recR [H]

Synonym: XOO_0966

Alternate gene names: 84622623

Gene position: 1055884-1056477 (Clockwise)

Preceding gene: 84622622

Following gene: 84622624

Centisome position: 21.37

GC content: 66.84

Gene sequence:

>594_bases
ATGTCCTCACTGCTAGAACAACTGATCGAGGCCTTCCGGGTATTGCCCGGTGTGGGCCAGAAGTCGGCGCAGCGCATGGC
GTATCACGTGCTCGAGCGCGAGCGCGAGGGTGGGCGGCGTCTGGCGACGACGTTGGCCAATGCGGTGGAAAAGGTGGGGC
ATTGCGTGCAGTGCCGCGACTTCACCGAGTCCGAGATCTGCACCATTTGCGCCAGCAGCAGTCGCGACCGGCAGCAATTG
TGCGTGGTCGAATCGCCGGCCGACCGCCTGGCAATCGAGCATGCCACCGGCTACCGCGGGCTGTATTTCGTCCTGCAGGG
GCGCCTGTCGCCGCTGGATGGCATCGGCCCACGCGAACTGGGATTGGATCGGCTCGGCGAGCGTCTGGCCGCTGGCGAAG
TGACCGAAATGATCATCGCCACCAACGCCACCGTGGAAGGCGAGGCGACCGCCCATTACCTCGCGCAGCTTGCCCGCCAG
CACGCGGTACGCCCGAGCCGGCTTGCCCAGGGCATGCCGCTGGGCGGCGAGCTGGAATACGTGGATCGCGGCACCCTGTC
GCACGCCTTCGGCACCCGCAGTGAGGTGCTGTGA

Upstream 100 bases:

>100_bases
TGAGCGAAGGGATTCGGGAGTCGGGATTTGGGATGAGCTAAGTGCAAAGGCCTTTGCCGTTGCGAATTCCAAATCCCGAA
TTTCCAATCCCGGCCACCCA

Downstream 100 bases:

>100_bases
GGGCGGGGATTGGGGAGGCGGGATTTGGGATTCGCAAAGCCGTGCTGGCGCGCACGGTAAGCTGTTACCAATCCCGAATC
ACGAATTTCCAATCCCGAAC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDFTESEICTICASSSRDRQQL
CVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPRELGLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQ
HAVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL

Sequences:

>Translated_197_residues
MSSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDFTESEICTICASSSRDRQQL
CVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPRELGLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQ
HAVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL
>Mature_196_residues
SSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRDFTESEICTICASSSRDRQQLC
VVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPRELGLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQH
AVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=58.1632653061224, Blast_Score=231, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21532; Mature: 21401

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRD
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
FTESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPREL
CCHHHHHHHHCCCCCCCHHEEEEECCHHHHHHHHCCCCCHHHEEEECCCCCCCCCCHHHC
GLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEY
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEH
VDRGTLSHAFGTRSEVL
HCCCHHHHHHCCHHCCC
>Mature Secondary Structure 
SSLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLATTLANAVEKVGHCVQCRD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
FTESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRGLYFVLQGRLSPLDGIGPREL
CCHHHHHHHHCCCCCCCHHEEEEECCHHHHHHHHCCCCCHHHEEEECCCCCCCCCCHHHC
GLDRLGERLAAGEVTEMIIATNATVEGEATAHYLAQLARQHAVRPSRLAQGMPLGGELEY
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEH
VDRGTLSHAFGTRSEVL
HCCCHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]