Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is xpsN [H]
Identifier: 84622437
GI number: 84622437
Start: 845627
End: 846436
Strand: Direct
Name: xpsN [H]
Synonym: XOO_0780
Alternate gene names: 84622437
Gene position: 845627-846436 (Clockwise)
Preceding gene: 84622436
Following gene: 84622438
Centisome position: 17.12
GC content: 68.89
Gene sequence:
>810_bases ATGCGCCTTGACATGATCGGCCTGCGCACCTGGTTGCTGGCCACCGTGGTCGGGTGGGCGATGCTGGTGTGCGCGCTGGC CGTTGCCGGCCTGGGCAAGCGCGTCGAGCTGCTGCCCGACGACCCGGCCTTGGTGCAGCGCCTGCCCACGTTACCGGCAC CGGCACCGGAGCGCCTGGGCGCGTTCGAAAAATATTCGGAAATCGCCGCGCATCCGGCGTTCGCCGAAGACCGCCTGCCG CATCCGTTCTTCCTGTCCGGCAACGACGGCAGCGGCGCTGCTTCGACAGTGCGCCTGACCGGCGTGCTGCTGACCGATAC CTTCAAGATGGCGACGTTGAGCCTGGACCCACAGGATTCGGTGCGCGTGCAACTGGGCGGTGATGCGGTCAAAGGCTGGC GCCTGCTCGCCTTGCAGCCGCGTAGCGCCACCATCGAAGGCCCCAGCGGCACGCAAACGCTGGAATTGCACGTGTTCAAC GGCCAGGGCGGGCAGCCGCCCACTGCCAATGCCGCCGCACGTGGTGCCGGTACTGCGACTGCGCCGGTGCCGTCTCCCGA CGCTGCGGCAGTTGCCGTGCCGCCGCCGCAACAGCAACAACCGCAACCGCAACCGCAATCCGTGCCGCCGGTGCAACAGC CCGGCTGGCAGGCACTGCCAACCGTGCAGCCGCAGCGTAGCGATGGCGCGCAGGAAGCTCCACGCCCCTCCGACGATCAG ATGCGTGCCATCCGCGAACGCATCGAAGCCCGACGCCGCCAGCTGCAACAGCAGCGCCAGAGCGGCTCTCCCCCCGGTCA GACCCAATGA
Upstream 100 bases:
>100_bases ATTGCCTTCGAACTGGCCGGTTATCTGCGCCCGGGCGCCAGCGCCGCACCGCTGAATAACGAAACCGCACCTGCCGCTCC CAACGCCGCGGAGGCCAGCA
Downstream 100 bases:
>100_bases GTGAACGCATGACGCCGCGCCTGTTTCCCGTATCCCTGCTGATTGGCCTGCTGGCCGGTTGCGCCACCACTCCGCCGCCG GACGTGCGCCGCGACGCGCG
Product: general secretion pathway protein N
Products: NA
Alternate protein names: Protein xpsN [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLGAFEKYSEIAAHPAFAEDRLP HPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDSVRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFN GQGGQPPTANAAARGAGTATAPVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ MRAIRERIEARRRQLQQQRQSGSPPGQTQ
Sequences:
>Translated_269_residues MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLGAFEKYSEIAAHPAFAEDRLP HPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDSVRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFN GQGGQPPTANAAARGAGTATAPVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ MRAIRERIEARRRQLQQQRQSGSPPGQTQ >Mature_269_residues MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLGAFEKYSEIAAHPAFAEDRLP HPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDSVRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFN GQGGQPPTANAAARGAGTATAPVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ MRAIRERIEARRRQLQQQRQSGSPPGQTQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28597; Mature: 28597
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHH AFEKYSEIAAHPAFAEDRLPHPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDS HHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCC VRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFNGQGGQPPTANAAARGAGTAT EEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCC APVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH MRAIRERIEARRRQLQQQRQSGSPPGQTQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRLDMIGLRTWLLATVVGWAMLVCALAVAGLGKRVELLPDDPALVQRLPTLPAPAPERLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHH AFEKYSEIAAHPAFAEDRLPHPFFLSGNDGSGAASTVRLTGVLLTDTFKMATLSLDPQDS HHHHHHHHHCCCCCHHCCCCCCEEEECCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCC VRVQLGGDAVKGWRLLALQPRSATIEGPSGTQTLELHVFNGQGGQPPTANAAARGAGTAT EEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCC APVPSPDAAAVAVPPPQQQQPQPQPQSVPPVQQPGWQALPTVQPQRSDGAQEAPRPSDDQ CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH MRAIRERIEARRRQLQQQRQSGSPPGQTQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10692359; 12024217; 1313415 [H]