Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is xpsM [H]
Identifier: 84622436
GI number: 84622436
Start: 844984
End: 845637
Strand: Direct
Name: xpsM [H]
Synonym: XOO_0779
Alternate gene names: 84622436
Gene position: 844984-845637 (Clockwise)
Preceding gene: 84622435
Following gene: 84622437
Centisome position: 17.1
GC content: 65.6
Gene sequence:
>654_bases ATGCCACGCAGCGTTAAGCGCGATCGCTGGATCGCTTTGGGCCTGCTGTTGCTGGTGCTCGGCGTGGCCTACCTGGTGCT GGTGCACCCGTGGTTCACGCAACCGATGATTGCGGTGCAGGACGACCTGCAAGCGCTACGCGAGCGCGAACTGCGCGTGC GTGTGCAGCTGCAGCAGGCAACGGAAGTCAGCAAGCGGCTGCGGCAGGCGCGTCAGACGCTGGAAAGCCGCCCAGGCTTT TTGCCGGAAACCTCGGCCGAACTCGCCTCCGCTGGGCTGGTGCAGCGCCTCGAGCGCGCGGTTGTGGAAGCCAGCCCCGG TAACCGCAGTTGCGCCATCAGCAACCGTTCGCCGCTGCAGCCCGAGAGCAAGAACCGCTTCACCCGCGTGGCGGTGCAAG TGCGTTTGCGCTGCGGCACGCCAGAACTGGCTTCGGTGCTGTACAGCCTGGAAAACGGCACGCCGCGGTTGTTCGTGGAC AACCTCAACGTGATGGCGCAGCGCTACCAGCTCTCGCCGAACGAAAGCGGCAATGGTCTGGATATTGCCTTCGAACTGGC CGGTTATCTGCGCCCGGGCGCCAGCGCCGCACCGCTGAATAACGAAACCGCACCTGCCGCTCCCAACGCCGCGGAGGCCA GCAATGCGCCTTGA
Upstream 100 bases:
>100_bases CCATCGCTGACCGGCGTGCTGCAGAGCGATGCCGGCCGTAACGTCGACCGCTTCACCATCACCGCCGAACTTGCCGGCCC CGATGCGAAGGAGGCGGCCG
Downstream 100 bases:
>100_bases CATGATCGGCCTGCGCACCTGGTTGCTGGCCACCGTGGTCGGGTGGGCGATGCTGGTGTGCGCGCTGGCCGTTGCCGGCC TGGGCAAGCGCGTCGAGCTG
Product: general secretion pathway protein M
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPRSVKRDRWIALGLLLLVLGVAYLVLVHPWFTQPMIAVQDDLQALRERELRVRVQLQQATEVSKRLRQARQTLESRPGF LPETSAELASAGLVQRLERAVVEASPGNRSCAISNRSPLQPESKNRFTRVAVQVRLRCGTPELASVLYSLENGTPRLFVD NLNVMAQRYQLSPNESGNGLDIAFELAGYLRPGASAAPLNNETAPAAPNAAEASNAP
Sequences:
>Translated_217_residues MPRSVKRDRWIALGLLLLVLGVAYLVLVHPWFTQPMIAVQDDLQALRERELRVRVQLQQATEVSKRLRQARQTLESRPGF LPETSAELASAGLVQRLERAVVEASPGNRSCAISNRSPLQPESKNRFTRVAVQVRLRCGTPELASVLYSLENGTPRLFVD NLNVMAQRYQLSPNESGNGLDIAFELAGYLRPGASAAPLNNETAPAAPNAAEASNAP >Mature_216_residues PRSVKRDRWIALGLLLLVLGVAYLVLVHPWFTQPMIAVQDDLQALRERELRVRVQLQQATEVSKRLRQARQTLESRPGFL PETSAELASAGLVQRLERAVVEASPGNRSCAISNRSPLQPESKNRFTRVAVQVRLRCGTPELASVLYSLENGTPRLFVDN LNVMAQRYQLSPNESGNGLDIAFELAGYLRPGASAAPLNNETAPAAPNAAEASNAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007690 [H]
Pfam domain/function: PF10741 GspM_II [H]
EC number: NA
Molecular weight: Translated: 23819; Mature: 23687
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSVKRDRWIALGLLLLVLGVAYLVLVHPWFTQPMIAVQDDLQALRERELRVRVQLQQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TEVSKRLRQARQTLESRPGFLPETSAELASAGLVQRLERAVVEASPGNRSCAISNRSPLQ HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC PESKNRFTRVAVQVRLRCGTPELASVLYSLENGTPRLFVDNLNVMAQRYQLSPNESGNGL CCHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCE DIAFELAGYLRPGASAAPLNNETAPAAPNAAEASNAP EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRSVKRDRWIALGLLLLVLGVAYLVLVHPWFTQPMIAVQDDLQALRERELRVRVQLQQA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TEVSKRLRQARQTLESRPGFLPETSAELASAGLVQRLERAVVEASPGNRSCAISNRSPLQ HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC PESKNRFTRVAVQVRLRCGTPELASVLYSLENGTPRLFVDNLNVMAQRYQLSPNESGNGL CCHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCE DIAFELAGYLRPGASAAPLNNETAPAAPNAAEASNAP EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313415; 12024217 [H]