Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is insI1 [C]
Identifier: 84622426
GI number: 84622426
Start: 835847
End: 836815
Strand: Direct
Name: insI1 [C]
Synonym: XOO_0769
Alternate gene names: 84622426
Gene position: 835847-836815 (Clockwise)
Preceding gene: 84622425
Following gene: 84622427
Centisome position: 16.92
GC content: 62.54
Gene sequence:
>969_bases ATGGAGTTGCCCATGTCATCCAGCCGCCTGGACCTGTCAGAACGATACCGCCTACATGCGTTATATGAAACCGGGATGTC GATGCGCGCCATCGCCGATGTATTGGCGCGTGCGCCCAGCACGATCAGTCGTGAGCTGCGCCGCAACCGGCACGCGGCGA AGTATCGGCCCGATCACGCGCAGCGCATCAGCGAGCATCGGCGCGCACAGGCCAGCCGGCGACCACGCATCAACGCTGAG CGTATCCGTCAGATCGAGGTCCTGCTGAGGGAGGACGTCAGTCCCGAACAGATCGCCGGCCGCACCGGCTTGGCCAGTCA CGAATGGATCTATCGGCACATCTACGCCGATCAGAAGCGCGGTGGTCAGTTGTTCATGCATCTACGCAAACGCCGCCGCA AGCGCCGTCGGCGTGGCGTGCGCGATGGCCGCGGGCAGCTGACGCATCGGCGCAGCTGGACACAGCGCCCCAGTGTGGTT GAGCAGCGAAGCCGTATCGGCGACTGGGAGCTGGAGACCATCAGGGCCTCGCACGGAAAGGGCGTGGTGGTCAGCATGAC CGAACGCCGCAGTCGCCTGCATCTGCTGGCTTACTCGCCCGACGGCACCGCCGAGAACGTGCGCAACGCCATTGTCCAGC GACTGGGCGGCCTGCGCCATGCAGTTCACACCCTCACCGCCGACAACGGCAAGGAGTTCGCTGATCATCGGCTCATTGCC GCCTGCCTGCAGAGCGATTTCTATTTCGCAGATCCGTACTGCCCATGGCAGCGCGGCAGCAACGAGAATGCCAACGGATT GACACGCCAATACTTGCCACGACAGACCGATTTCAGCACCATCACCGATGCGCACCTGCGATGGATCGAGCAGCGGCTCT ACAATCGTCCGCGCAAGATACTTGGATTCAAAACGCCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAACAGCGTTGCGAAT CAGAGTTGA
Upstream 100 bases:
>100_bases CGGCGGCGTCACCTATTACTCGGCGGCTTCAACTCTGGATCGCAACACCAACGGTTGTGAAGTGATCCAGGCGACCTGAC CTGAGCGACTTCACTACCAA
Downstream 100 bases:
>100_bases ATTCGCCCTCCAACTACGGCAGCAAGGTCGACCTGTCCGGCCCGGGCGGCGGTGGTAGCGTGGATGGCAATCCGGGCGGT TACATCTGGCAGGCCGGCTA
Product: IS1112 transposase
Products: NA
Alternate protein names: Transposon TN4551 [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MELPMSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNRHAAKYRPDHAQRISEHRRAQASRRPRINAE RIRQIEVLLREDVSPEQIAGRTGLASHEWIYRHIYADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVV EQRSRIGDWELETIRASHGKGVVVSMTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIA ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVAN QS
Sequences:
>Translated_322_residues MELPMSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNRHAAKYRPDHAQRISEHRRAQASRRPRINAE RIRQIEVLLREDVSPEQIAGRTGLASHEWIYRHIYADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVV EQRSRIGDWELETIRASHGKGVVVSMTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIA ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVAN QS >Mature_322_residues MELPMSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNRHAAKYRPDHAQRISEHRRAQASRRPRINAE RIRQIEVLLREDVSPEQIAGRTGLASHEWIYRHIYADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVV EQRSRIGDWELETIRASHGKGVVVSMTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIA ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVAN QS
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=331, Percent_Identity=31.7220543806647, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1790736, Length=331, Percent_Identity=31.7220543806647, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1787671, Length=331, Percent_Identity=31.7220543806647, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 37597; Mature: 37597
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPMSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNRHAAKYRPDHA CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH QRISEHRRAQASRRPRINAERIRQIEVLLREDVSPEQIAGRTGLASHEWIYRHIYADQKR HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCCC GGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGK CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCC GVVVSMTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIA CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKI HHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHH LGFKTPLEVFSEEVLNSVANQS HCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELPMSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNRHAAKYRPDHA CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH QRISEHRRAQASRRPRINAERIRQIEVLLREDVSPEQIAGRTGLASHEWIYRHIYADQKR HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCCC GGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGK CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCC GVVVSMTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIA CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKI HHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHH LGFKTPLEVFSEEVLNSVANQS HCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2820936 [H]