Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84622425

Identifier: 84622425

GI number: 84622425

Start: 834581

End: 835333

Strand: Direct

Name: 84622425

Synonym: XOO_0768

Alternate gene names: NA

Gene position: 834581-835333 (Clockwise)

Preceding gene: 84622424

Following gene: 84622426

Centisome position: 16.89

GC content: 65.6

Gene sequence:

>753_bases
GTGATCGACAAGAATTTCCGTCTCAACCCGCTGACCGGCGCCATCCTGATGATGGCCTTTGGTGCGTCTGGCGCCCTCGC
TGCCGCCCCCAAACTGCTGGTCAAGGAACCGACCCAGGCAGCCCCGGCCGGCGCAGCGTTCGGTAGCCGGTTGATCGTGC
GTTACAAGGACAACACCGCTGCTGCAACCGATCGCAGCAGCAAGCTGAGCGCCGTGCAGGCCGCGGTGGGCCGCGTTGGT
GGCAGCACCAGTGCGCGTAGCAGCGCTGCCGTCGCCAAGGCGATTTACGTGCGTAAGCTGGGCATTGGCTCGGACCTGAT
CAAGCTGTCCAGCACGCTGACCGCCGCGCAGGTGGACAAGGTGGTGGTTGAGCTGAAGAACGACCCGTCCGTGGCCGACG
TGCAGATCGACCGCATGCTGCGCCCGATTGACATCAGCAAGCGCGTTGCCGCCGCCGATGTGAGCCCGCACCTTGTTCCC
AACGAACCGTTGTACGCGCAGCACCAGTGGCACCCGAGCAATCCCCACGGCGGCATCAATGCGCCGGGCGCGTGGGATCT
GTCGCAGGGCGCCGGCGTGGTGGTGGCGGTGCTGGATACCGACATCCTGCCGGGCCATCCGGATTTCGCCGGCAACATCC
TGCAGGGCTATGACTTCATCACCGACGCTGAAGTCTCGCGTCGTCCTACCGATGCGCGCGTGCCGGGCGCACTCGATTAC
GGCGACTGGCAGGAGGCCGACAACGTGTGCTAA

Upstream 100 bases:

>100_bases
GGGGTGGCCGGCAAGGACGCAGCGCACGGCACCGCGGGACGCAGCGATTGCGCTGGCTGCTCCCAGCCTGATTCACGAAA
AATACGAAGACGACTTCACC

Downstream 100 bases:

>100_bases
ATCGGGTCGACAGCGCAGGCAAGCACCTGCCACGGCACCCATGTCTCTAGCACCGTGGCCGAAGCGACCAATAACGGCGT
GGGCATGGCTGGCGTGGCGC

Product: truncated serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTAAATDRSSKLSAVQAAVGRVG
GSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDKVVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVP
NEPLYAQHQWHPSNPHGGINAPGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY
GDWQEADNVC

Sequences:

>Translated_250_residues
MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTAAATDRSSKLSAVQAAVGRVG
GSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDKVVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVP
NEPLYAQHQWHPSNPHGGINAPGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY
GDWQEADNVC
>Mature_250_residues
MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTAAATDRSSKLSAVQAAVGRVG
GSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDKVVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVP
NEPLYAQHQWHPSNPHGGINAPGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY
GDWQEADNVC

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007280
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]

EC number: NA

Molecular weight: Translated: 26183; Mature: 26183

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTA
CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCC
AATDRSSKLSAVQAAVGRVGGSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDK
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
VVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVPNEPLYAQHQWHPSNPHGGIN
EEEEECCCCCEEHEEHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCC
GDWQEADNVC
CCCHHHCCCC
>Mature Secondary Structure
MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTA
CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCC
AATDRSSKLSAVQAAVGRVGGSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDK
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
VVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVPNEPLYAQHQWHPSNPHGGIN
EEEEECCCCCEEHEEHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCC
GDWQEADNVC
CCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2187155; 12024217 [H]