Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622425
Identifier: 84622425
GI number: 84622425
Start: 834581
End: 835333
Strand: Direct
Name: 84622425
Synonym: XOO_0768
Alternate gene names: NA
Gene position: 834581-835333 (Clockwise)
Preceding gene: 84622424
Following gene: 84622426
Centisome position: 16.89
GC content: 65.6
Gene sequence:
>753_bases GTGATCGACAAGAATTTCCGTCTCAACCCGCTGACCGGCGCCATCCTGATGATGGCCTTTGGTGCGTCTGGCGCCCTCGC TGCCGCCCCCAAACTGCTGGTCAAGGAACCGACCCAGGCAGCCCCGGCCGGCGCAGCGTTCGGTAGCCGGTTGATCGTGC GTTACAAGGACAACACCGCTGCTGCAACCGATCGCAGCAGCAAGCTGAGCGCCGTGCAGGCCGCGGTGGGCCGCGTTGGT GGCAGCACCAGTGCGCGTAGCAGCGCTGCCGTCGCCAAGGCGATTTACGTGCGTAAGCTGGGCATTGGCTCGGACCTGAT CAAGCTGTCCAGCACGCTGACCGCCGCGCAGGTGGACAAGGTGGTGGTTGAGCTGAAGAACGACCCGTCCGTGGCCGACG TGCAGATCGACCGCATGCTGCGCCCGATTGACATCAGCAAGCGCGTTGCCGCCGCCGATGTGAGCCCGCACCTTGTTCCC AACGAACCGTTGTACGCGCAGCACCAGTGGCACCCGAGCAATCCCCACGGCGGCATCAATGCGCCGGGCGCGTGGGATCT GTCGCAGGGCGCCGGCGTGGTGGTGGCGGTGCTGGATACCGACATCCTGCCGGGCCATCCGGATTTCGCCGGCAACATCC TGCAGGGCTATGACTTCATCACCGACGCTGAAGTCTCGCGTCGTCCTACCGATGCGCGCGTGCCGGGCGCACTCGATTAC GGCGACTGGCAGGAGGCCGACAACGTGTGCTAA
Upstream 100 bases:
>100_bases GGGGTGGCCGGCAAGGACGCAGCGCACGGCACCGCGGGACGCAGCGATTGCGCTGGCTGCTCCCAGCCTGATTCACGAAA AATACGAAGACGACTTCACC
Downstream 100 bases:
>100_bases ATCGGGTCGACAGCGCAGGCAAGCACCTGCCACGGCACCCATGTCTCTAGCACCGTGGCCGAAGCGACCAATAACGGCGT GGGCATGGCTGGCGTGGCGC
Product: truncated serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTAAATDRSSKLSAVQAAVGRVG GSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDKVVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVP NEPLYAQHQWHPSNPHGGINAPGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY GDWQEADNVC
Sequences:
>Translated_250_residues MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTAAATDRSSKLSAVQAAVGRVG GSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDKVVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVP NEPLYAQHQWHPSNPHGGINAPGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY GDWQEADNVC >Mature_250_residues MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTAAATDRSSKLSAVQAAVGRVG GSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDKVVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVP NEPLYAQHQWHPSNPHGGINAPGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY GDWQEADNVC
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 26183; Mature: 26183
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTA CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCC AATDRSSKLSAVQAAVGRVGGSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDK CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE VVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVPNEPLYAQHQWHPSNPHGGIN EEEEECCCCCEEHEEHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCC GDWQEADNVC CCCHHHCCCC >Mature Secondary Structure MIDKNFRLNPLTGAILMMAFGASGALAAAPKLLVKEPTQAAPAGAAFGSRLIVRYKDNTA CCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCC AATDRSSKLSAVQAAVGRVGGSTSARSSAAVAKAIYVRKLGIGSDLIKLSSTLTAAQVDK CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE VVVELKNDPSVADVQIDRMLRPIDISKRVAAADVSPHLVPNEPLYAQHQWHPSNPHGGIN EEEEECCCCCEEHEEHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGAWDLSQGAGVVVAVLDTDILPGHPDFAGNILQGYDFITDAEVSRRPTDARVPGALDY CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCC GDWQEADNVC CCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]