Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622427

Identifier: 84622427

GI number: 84622427

Start: 836991

End: 837521

Strand: Direct

Name: 84622427

Synonym: XOO_0770

Alternate gene names: NA

Gene position: 836991-837521 (Clockwise)

Preceding gene: 84622426

Following gene: 84622428

Centisome position: 16.94

GC content: 65.91

Gene sequence:

>531_bases
GTGGCTGGCGTCGTGGCGTTGGTGCAGAGCGCGGCGATCGGTCTGGGCAAAGGCCCGCTGACCCCGGCTGCGGTCGAAGC
GCTGCTCAAGAAGACCAGCCGTCGCTTCCCGGTGACCCCGCCGGCCAGCACCCCGATCGGTAGCGGCATCGTCGATGCCA
AGGCCGCGTTGAAAGCGGTGTTGGAAGAGCCGTGCGACCCGGCCACCCAGAGCTGCGCACCGAGCGCTATCGAACTGACC
AACAAGGCACCGGTGGCTGGACTGAGCGGCGCCGCCGGCAGCTCCACGCTGTACCGCTTCGACGCCAAGGCCGGTGCTTT
GCTCAGCTTCATCACCTACGGCGGCACCGGCGATGTGTCGATGTACGTCAGCTTTGGGGCCGAGCCCAGCACGACCAGCT
ACGACGCCAAGTCGACCCGCCCGGGCAACAGCGAAACCGTGCGTTTCACTGCACCCAAGGCTGGCACATACTACATCAAG
TTGGTCTGTGCGGCGAGCTACGCGAAGCTGACGCTCGTTGCACGACAGTAA

Upstream 100 bases:

>100_bases
GCGGTTACATCTGGCAGGCCGGCTACACCGGTGCCACCCGCCGACCTCGGATCGCTATCCCTATATAGCTTTAGGCGGCA
CCTCGATGGCCTCCCCGCAC

Downstream 100 bases:

>100_bases
GTAGCGAAATAGTGTGGCCGATGCCCCCTGCCAATCACCGGGGGCATCGCTTTTCAAGGCGATTCAGATGCGTGCGGTTG
ATCGTCCCGGCAAACTGCTA

Product: truncated protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAGVVALVQSAAIGLGKGPLTPAAVEALLKKTSRRFPVTPPASTPIGSGIVDAKAALKAVLEEPCDPATQSCAPSAIELT
NKAPVAGLSGAAGSSTLYRFDAKAGALLSFITYGGTGDVSMYVSFGAEPSTTSYDAKSTRPGNSETVRFTAPKAGTYYIK
LVCAASYAKLTLVARQ

Sequences:

>Translated_176_residues
MAGVVALVQSAAIGLGKGPLTPAAVEALLKKTSRRFPVTPPASTPIGSGIVDAKAALKAVLEEPCDPATQSCAPSAIELT
NKAPVAGLSGAAGSSTLYRFDAKAGALLSFITYGGTGDVSMYVSFGAEPSTTSYDAKSTRPGNSETVRFTAPKAGTYYIK
LVCAASYAKLTLVARQ
>Mature_175_residues
AGVVALVQSAAIGLGKGPLTPAAVEALLKKTSRRFPVTPPASTPIGSGIVDAKAALKAVLEEPCDPATQSCAPSAIELTN
KAPVAGLSGAAGSSTLYRFDAKAGALLSFITYGGTGDVSMYVSFGAEPSTTSYDAKSTRPGNSETVRFTAPKAGTYYIKL
VCAASYAKLTLVARQ

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007280
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]

EC number: NA

Molecular weight: Translated: 17849; Mature: 17717

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVVALVQSAAIGLGKGPLTPAAVEALLKKTSRRFPVTPPASTPIGSGIVDAKAALKAV
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LEEPCDPATQSCAPSAIELTNKAPVAGLSGAAGSSTLYRFDAKAGALLSFITYGGTGDVS
HHCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEE
MYVSFGAEPSTTSYDAKSTRPGNSETVRFTAPKAGTYYIKLVCAASYAKLTLVARQ
EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEECC
>Mature Secondary Structure 
AGVVALVQSAAIGLGKGPLTPAAVEALLKKTSRRFPVTPPASTPIGSGIVDAKAALKAV
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LEEPCDPATQSCAPSAIELTNKAPVAGLSGAAGSSTLYRFDAKAGALLSFITYGGTGDVS
HHCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEE
MYVSFGAEPSTTSYDAKSTRPGNSETVRFTAPKAGTYYIKLVCAASYAKLTLVARQ
EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2187155; 12024217 [H]