Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622232
Identifier: 84622232
GI number: 84622232
Start: 624403
End: 625671
Strand: Direct
Name: 84622232
Synonym: XOO_0575
Alternate gene names: NA
Gene position: 624403-625671 (Clockwise)
Preceding gene: 84622231
Following gene: 84622233
Centisome position: 12.64
GC content: 64.07
Gene sequence:
>1269_bases ATGGTGCTGTGGAAATACGAATTGCTGTTGCTGCTGCGCGCACGTGCGGCGCTTGCCGGGTTGTTGCTGCTTGCCATGCT GACCGTCTGCAGCCTGTTGTCCGGGCAGTACGTCATTGCGGCGCAACGCGACAACATCGCGAAGATTGCGGCGTTACAGC GCGAAGATAGCGCTGCGGTGGAAGACTATGTCGCGCGTTCCAACGATGCCGGCAGCGCGGCGTATTACAGTTCTTACCCC ACCTGGGACAGGCCATCGCCGTTAGCGTTTGCCGCGGTGGGCATGCGCGATGTGTCGCCGTACATTTTGCGCGTGCGTGC GTTGGGGCTGGAAGCGCAGATCCATGATGGCGACAGCTACAACCCCGAGCTCGCACTGGCTGGCCGTTTCGACTATGCGT TCGTGCTGGTGTTCCTGCTGCCGCTGTTCGTGATTGCGCTGCTGTTCGATCTGCGTTCGGGCGAGCGTGAAGCTGGCCGG GCACGCATGCTAGCCGCACTGCCGGGTGCACGTACCGCGCTGCTGGTGCGGCGTGTAGTGGTGCGCGCCGCAGCGGTGCT GTTGTGCGTGAGCGTGCCGTTCGTCATTTTCGCCACGCTCAATGCAGTGCCGTTGCTGCAACAACTGGCAGTGCTGGCGC TGGGCGCAGGCTATCTGCTGTTCTGGGTCATGCTGGCGGTGTTGGTCGGGCGCATCCAGTGGCGGCCTGCGGCGCATGCC ACCGCATTGGCCACCTGCTGGGTGATGTTGGCACTGGTGGCTCCGGCGCTGGCGCACGTGGCGATCAATCAAACGGTGCC AGTCAATCAGGGCACCGAGATTGCGCGGCTGCAGCGCGAGGCGGTCAACCATGCCTGGGACATCCCGCGCCAGGACACCA TGCGGGCGTTCTATGCGCGCAATCCGCAATGGGCCGACTCCGCGCCGTTGACCACAGCGTTCCACTACAAGTGGTACTTC GCATTCCACGAAAATGGCGACCAGCAGGTGGCGCCGCAGGTGGCAGCGTATCGCAATGGTTTGCAGCGCCGCGAAGCGCT GGCGCAACGCGTGGCAAGCGTGTTGCCGCCAGTTGCGCTGCAGGCAGCGCTGACGCGCCTGGCCGACACCGATCTGCAGG CACAGCTGGCGTATCAGGACCGCATTCGCGCATATCACCGGGCGCTGCGCACGTTCTACTACGGCTATCTGTTCCGCGAC CGCCCGTTTACGCGCGACGACTTCGGGCGTGCGCCACGTTTCGATGCAACGGCCGATCCTGCCTCATAG
Upstream 100 bases:
>100_bases TTGGCACGGCAGGCGCGGCGCTTGGTCTGATCGGCGCCTGGTTGCTCGCCGCGCTATGCATGTTGGTTGCAGCCGGGCGA CGTGTGGGAGTGGTGCGCTG
Downstream 100 bases:
>100_bases CGACAGCCGCGTTTCACCTCTCTTCACCTCTCTCTTTTTCACTTGCGACCCAGGCCTGCTGCGCCAAGGTCTTTCAGGAG TTCTGCCCGATGCCCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MVLWKYELLLLLRARAALAGLLLLAMLTVCSLLSGQYVIAAQRDNIAKIAALQREDSAAVEDYVARSNDAGSAAYYSSYP TWDRPSPLAFAAVGMRDVSPYILRVRALGLEAQIHDGDSYNPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGR ARMLAALPGARTALLVRRVVVRAAAVLLCVSVPFVIFATLNAVPLLQQLAVLALGAGYLLFWVMLAVLVGRIQWRPAAHA TALATCWVMLALVAPALAHVAINQTVPVNQGTEIARLQREAVNHAWDIPRQDTMRAFYARNPQWADSAPLTTAFHYKWYF AFHENGDQQVAPQVAAYRNGLQRREALAQRVASVLPPVALQAALTRLADTDLQAQLAYQDRIRAYHRALRTFYYGYLFRD RPFTRDDFGRAPRFDATADPAS
Sequences:
>Translated_422_residues MVLWKYELLLLLRARAALAGLLLLAMLTVCSLLSGQYVIAAQRDNIAKIAALQREDSAAVEDYVARSNDAGSAAYYSSYP TWDRPSPLAFAAVGMRDVSPYILRVRALGLEAQIHDGDSYNPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGR ARMLAALPGARTALLVRRVVVRAAAVLLCVSVPFVIFATLNAVPLLQQLAVLALGAGYLLFWVMLAVLVGRIQWRPAAHA TALATCWVMLALVAPALAHVAINQTVPVNQGTEIARLQREAVNHAWDIPRQDTMRAFYARNPQWADSAPLTTAFHYKWYF AFHENGDQQVAPQVAAYRNGLQRREALAQRVASVLPPVALQAALTRLADTDLQAQLAYQDRIRAYHRALRTFYYGYLFRD RPFTRDDFGRAPRFDATADPAS >Mature_422_residues MVLWKYELLLLLRARAALAGLLLLAMLTVCSLLSGQYVIAAQRDNIAKIAALQREDSAAVEDYVARSNDAGSAAYYSSYP TWDRPSPLAFAAVGMRDVSPYILRVRALGLEAQIHDGDSYNPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGR ARMLAALPGARTALLVRRVVVRAAAVLLCVSVPFVIFATLNAVPLLQQLAVLALGAGYLLFWVMLAVLVGRIQWRPAAHA TALATCWVMLALVAPALAHVAINQTVPVNQGTEIARLQREAVNHAWDIPRQDTMRAFYARNPQWADSAPLTTAFHYKWYF AFHENGDQQVAPQVAAYRNGLQRREALAQRVASVLPPVALQAALTRLADTDLQAQLAYQDRIRAYHRALRTFYYGYLFRD RPFTRDDFGRAPRFDATADPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46786; Mature: 46786
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLWKYELLLLLRARAALAGLLLLAMLTVCSLLSGQYVIAAQRDNIAKIAALQREDSAAV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCHHHH EDYVARSNDAGSAAYYSSYPTWDRPSPLAFAAVGMRDVSPYILRVRALGLEAQIHDGDSY HHHHHCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCC NPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGRARMLAALPGARTALLVRRVV CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH VRAAAVLLCVSVPFVIFATLNAVPLLQQLAVLALGAGYLLFWVMLAVLVGRIQWRPAAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TALATCWVMLALVAPALAHVAINQTVPVNQGTEIARLQREAVNHAWDIPRQDTMRAFYAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC NPQWADSAPLTTAFHYKWYFAFHENGDQQVAPQVAAYRNGLQRREALAQRVASVLPPVAL CCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QAALTRLADTDLQAQLAYQDRIRAYHRALRTFYYGYLFRDRPFTRDDFGRAPRFDATADP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCC AS CC >Mature Secondary Structure MVLWKYELLLLLRARAALAGLLLLAMLTVCSLLSGQYVIAAQRDNIAKIAALQREDSAAV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCHHHH EDYVARSNDAGSAAYYSSYPTWDRPSPLAFAAVGMRDVSPYILRVRALGLEAQIHDGDSY HHHHHCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCC NPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGRARMLAALPGARTALLVRRVV CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH VRAAAVLLCVSVPFVIFATLNAVPLLQQLAVLALGAGYLLFWVMLAVLVGRIQWRPAAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH TALATCWVMLALVAPALAHVAINQTVPVNQGTEIARLQREAVNHAWDIPRQDTMRAFYAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC NPQWADSAPLTTAFHYKWYFAFHENGDQQVAPQVAAYRNGLQRREALAQRVASVLPPVAL CCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QAALTRLADTDLQAQLAYQDRIRAYHRALRTFYYGYLFRDRPFTRDDFGRAPRFDATADP HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA