Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622231
Identifier: 84622231
GI number: 84622231
Start: 622943
End: 624403
Strand: Direct
Name: 84622231
Synonym: XOO_0574
Alternate gene names: NA
Gene position: 622943-624403 (Clockwise)
Preceding gene: 84622230
Following gene: 84622232
Centisome position: 12.61
GC content: 64.82
Gene sequence:
>1461_bases ATGAGGCTGCGTGAGGTTGTACGCATGAGCCCCGTGTTGCTGGTTGCGCGCGAAGAACTGCGCTACATGGCGCGCAACCG TTCCGCTGCCATCGGTGTGGTGTTGCTGATGCTGCTCACCTTGGTGGCGGCGTTGACTGCGGCCCACCATCAGTGCGAAG TCGCCGATTTCCGTGCGCGCCAGCAACAGGCTGCGCAGCAGGCATTCGAAGCGCAACCAGACCGGCATCCGCATCGCATG GTGCATTACGGCCACTTCATCTATCGCCGATTGCCGGCGCTGGCTGCATTCGATTCCGGCGTGGATGCATTCACTGGCAA CAGCATGTTTCTCGAAGGTCACCGCCAGAACACCGCCAACTTCGGCGATGTGCGTCAGAGCTCGTTGCTGGTGCGCTTCG GTCAGTTGACGCCTGCCTTCGTCTTGCAGGTGCTGGCGCCGTTGCTGCTGGTGTTTCTTGGCTATGGCGCAGTGGCGCGC GAGCAGGAAACCGGTACCTTGCGCGCGCTCCTGCTGCAGGGCGCCACGCGCCGGCAATTGCTCGGCGGTAAATATCTTGC GCTGGCGGCGGTGGCCGGCGCCTGCCTGCTGCCGGCCTTGGTCTGCCTGGCGCCCATCGCGTTGTTGCCGGGGCACGCAG TGCTGGTCGCGCTGCTGGTGTTGGCTTACAGCGTCTATCTGCTGGTGTGGTGTGCGTTGGTGCTTGCGATATCCATGCTG TGCCGGCGCGGCCGCGATGCGCTGCTGGTGCAGCTGGCGGTGTGGGTGTGGCTGGCCTTGCTGGTGCCGCGCGTGGCGCC GGACGTGGCCAGTGCCGCATACCGGCTGCCGACCCGGCTGGAAACCGACGTGGCGATTCAGCGTGACCTGCGCACGGTCG GCGACAGCCACAACCCGGACGATCCGCACTTTGCGCAATTCAAGCAGCAGACGTTGGCCCGTTACGGCGTGCAGCGCGTG GAAGACCTGCCGGTGAACTACAAGGGCTTGCTGGCGCTGGAAGGCGAGCGGCTGACCGCAAGCCTGTTCGAGCGCTATGC GGGACGCGATGCATCCATCCAGCAGCAACAGAATCTGCTGGTACGCGCATTTGTGTTGCTTAGCCCGACGGTGGCGCTGC GCGAGGTGTCGATGACGCTGGCAGAAACCGATCTACGCGCGCATCTGCGGTTCCTGGCGCAGGCCGAGCATTACCGCTAC ACCCTGGTGCAACACCTCAACCAGTTGCAGACCGACGCGGTGAGCATGGCCGACGACACCGCGCAGGATGCCGGTGCCGA CCGCCGTAAACGCATTTCGTCGGAGCATTGGCACGAGATTCCAGTGTTCGCCTTCCAGCCCGCGACCACCACCGAGGTGA TTGGCACGGCAGGCGCGGCGCTTGGTCTGATCGGCGCCTGGTTGCTCGCCGCGCTATGCATGTTGGTTGCAGCCGGGCGA CGTGTGGGAGTGGTGCGCTGA
Upstream 100 bases:
>100_bases CTTGGTTTTCTCGAAAACGGCCGGATTGCCGACGACATCGGCGCCGGCGACAGCGGCTTCGATGTGCGCACTCTGCATGC GCGTTTCGCACGCCCGCAGG
Downstream 100 bases:
>100_bases TGGTGCTGTGGAAATACGAATTGCTGTTGCTGCTGCGCGCACGTGCGGCGCTTGCCGGGTTGTTGCTGCTTGCCATGCTG ACCGTCTGCAGCCTGTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC-Type Transport System Permease Component; ABC Transporter Permease Protein
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRM VHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAR EQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRV EDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRY TLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR RVGVVR
Sequences:
>Translated_486_residues MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRM VHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAR EQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRV EDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRY TLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR RVGVVR >Mature_486_residues MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRM VHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAR EQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRV EDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRY TLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR RVGVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53528; Mature: 53528
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRAR CCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQAAQQAFEAQPDRHPHRMVHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTAN HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC FGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAREQETGTLRALLLQGATRRQL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHH LGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPD HHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC DPHFAQFKQQTLARYGVQRVEDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLL CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHH VRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQHLNQLQTDAVSMADDT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR HHHCCCHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVGVVR CCCCCC >Mature Secondary Structure MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRAR CCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQAAQQAFEAQPDRHPHRMVHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTAN HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC FGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAREQETGTLRALLLQGATRRQL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHH LGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPD HHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC DPHFAQFKQQTLARYGVQRVEDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLL CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHH VRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQHLNQLQTDAVSMADDT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR HHHCCCHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVGVVR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA