Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84622231

Identifier: 84622231

GI number: 84622231

Start: 622943

End: 624403

Strand: Direct

Name: 84622231

Synonym: XOO_0574

Alternate gene names: NA

Gene position: 622943-624403 (Clockwise)

Preceding gene: 84622230

Following gene: 84622232

Centisome position: 12.61

GC content: 64.82

Gene sequence:

>1461_bases
ATGAGGCTGCGTGAGGTTGTACGCATGAGCCCCGTGTTGCTGGTTGCGCGCGAAGAACTGCGCTACATGGCGCGCAACCG
TTCCGCTGCCATCGGTGTGGTGTTGCTGATGCTGCTCACCTTGGTGGCGGCGTTGACTGCGGCCCACCATCAGTGCGAAG
TCGCCGATTTCCGTGCGCGCCAGCAACAGGCTGCGCAGCAGGCATTCGAAGCGCAACCAGACCGGCATCCGCATCGCATG
GTGCATTACGGCCACTTCATCTATCGCCGATTGCCGGCGCTGGCTGCATTCGATTCCGGCGTGGATGCATTCACTGGCAA
CAGCATGTTTCTCGAAGGTCACCGCCAGAACACCGCCAACTTCGGCGATGTGCGTCAGAGCTCGTTGCTGGTGCGCTTCG
GTCAGTTGACGCCTGCCTTCGTCTTGCAGGTGCTGGCGCCGTTGCTGCTGGTGTTTCTTGGCTATGGCGCAGTGGCGCGC
GAGCAGGAAACCGGTACCTTGCGCGCGCTCCTGCTGCAGGGCGCCACGCGCCGGCAATTGCTCGGCGGTAAATATCTTGC
GCTGGCGGCGGTGGCCGGCGCCTGCCTGCTGCCGGCCTTGGTCTGCCTGGCGCCCATCGCGTTGTTGCCGGGGCACGCAG
TGCTGGTCGCGCTGCTGGTGTTGGCTTACAGCGTCTATCTGCTGGTGTGGTGTGCGTTGGTGCTTGCGATATCCATGCTG
TGCCGGCGCGGCCGCGATGCGCTGCTGGTGCAGCTGGCGGTGTGGGTGTGGCTGGCCTTGCTGGTGCCGCGCGTGGCGCC
GGACGTGGCCAGTGCCGCATACCGGCTGCCGACCCGGCTGGAAACCGACGTGGCGATTCAGCGTGACCTGCGCACGGTCG
GCGACAGCCACAACCCGGACGATCCGCACTTTGCGCAATTCAAGCAGCAGACGTTGGCCCGTTACGGCGTGCAGCGCGTG
GAAGACCTGCCGGTGAACTACAAGGGCTTGCTGGCGCTGGAAGGCGAGCGGCTGACCGCAAGCCTGTTCGAGCGCTATGC
GGGACGCGATGCATCCATCCAGCAGCAACAGAATCTGCTGGTACGCGCATTTGTGTTGCTTAGCCCGACGGTGGCGCTGC
GCGAGGTGTCGATGACGCTGGCAGAAACCGATCTACGCGCGCATCTGCGGTTCCTGGCGCAGGCCGAGCATTACCGCTAC
ACCCTGGTGCAACACCTCAACCAGTTGCAGACCGACGCGGTGAGCATGGCCGACGACACCGCGCAGGATGCCGGTGCCGA
CCGCCGTAAACGCATTTCGTCGGAGCATTGGCACGAGATTCCAGTGTTCGCCTTCCAGCCCGCGACCACCACCGAGGTGA
TTGGCACGGCAGGCGCGGCGCTTGGTCTGATCGGCGCCTGGTTGCTCGCCGCGCTATGCATGTTGGTTGCAGCCGGGCGA
CGTGTGGGAGTGGTGCGCTGA

Upstream 100 bases:

>100_bases
CTTGGTTTTCTCGAAAACGGCCGGATTGCCGACGACATCGGCGCCGGCGACAGCGGCTTCGATGTGCGCACTCTGCATGC
GCGTTTCGCACGCCCGCAGG

Downstream 100 bases:

>100_bases
TGGTGCTGTGGAAATACGAATTGCTGTTGCTGCTGCGCGCACGTGCGGCGCTTGCCGGGTTGTTGCTGCTTGCCATGCTG
ACCGTCTGCAGCCTGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC-Type Transport System Permease Component; ABC Transporter Permease Protein

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRM
VHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAR
EQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML
CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRV
EDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRY
TLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR
RVGVVR

Sequences:

>Translated_486_residues
MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRM
VHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAR
EQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML
CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRV
EDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRY
TLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR
RVGVVR
>Mature_486_residues
MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRM
VHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAR
EQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML
CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRV
EDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRY
TLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR
RVGVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53528; Mature: 53528

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRAR
CCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQAAQQAFEAQPDRHPHRMVHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTAN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
FGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAREQETGTLRALLLQGATRRQL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHH
LGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPD
HHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
DPHFAQFKQQTLARYGVQRVEDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHH
VRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQHLNQLQTDAVSMADDT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR
HHHCCCHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVGVVR
CCCCCC
>Mature Secondary Structure
MRLREVVRMSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRAR
CCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQAAQQAFEAQPDRHPHRMVHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTAN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
FGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAREQETGTLRALLLQGATRRQL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHH
LGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPD
HHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
DPHFAQFKQQTLARYGVQRVEDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHH
VRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQHLNQLQTDAVSMADDT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGR
HHHCCCHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVGVVR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA