Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is fct [H]

Identifier: 84622233

GI number: 84622233

Start: 625761

End: 627902

Strand: Direct

Name: fct [H]

Synonym: XOO_0576

Alternate gene names: 84622233

Gene position: 625761-627902 (Clockwise)

Preceding gene: 84622232

Following gene: 84622238

Centisome position: 12.67

GC content: 64.24

Gene sequence:

>2142_bases
ATGCCCGTTTTCTCGCGCCGCCGCATGCGGCATACGTTGCCCTTGCTCAGCCTGCTGGCCTGGGCCTGCAGCATTGCCTG
CGCGCAGGCCGACGCGTTGCGGGCGCGCGAGCTGGATGCGGTGCAGGTGCGCAGCCAGTACACGCCGTATCGCGAACTGA
GCATTACCGGCGCCACCAAGACCGATGCGCCGCTGCGTGATTTGCCGATCAGTGCGCGCGTGCTCGATCGGACCCTGCTG
GACGATGCCGGCGTGACCGATCTGGCAGGCGCACTGGAGCTGGCCAGCGGCATCACCAAGGCCAACAACCTGGGCGGGCT
CTGGGACAGCTATTCGATGCGCGGCTTCACCGGCGACCCGAATTTCAGTTCGGACTACATGGTCAACGGCTTCAATGCCA
GCCGCGGTTACAACGGCCTGCGTGATGCGGCCAACACGCAGAGCATCGAAGTCATCAAAGGGCCGGCGTCGGCCTTGTAT
GGCCGTGGCGAGCCGGGTGGGGTGGTCAACATCATCACCAAAAAGCCGCTGTTTCAGCCGCAGAACAGCGTGGATGTGTC
GGCCGGTCGCTTCGACAGTTATCGCGCCGCGATCGATAGCACCGGCCCACTGAGCGAGAGCGTCGCTTACCGCTTGAACG
TGATGCACAAGGATCAGCATAGCTTCCGCGACACTGTCGACAGCGATAACACCTTGCTGGCGCCGTCGCTGTTGTGGATG
CCGACGCCCGAAACCACGGTGTCGTATGAGCTGGAAGCCGTGCGGATCCATGCGCCGTTCGATCGCGGCGTGACCGCCAT
CGACGGCGATGCCAACCGGCTGCCGGCGTCGCGCTTTCTGGGCGAGCCGCGCGATGGCGACATCGATCTGCATTCCACCG
GGCATCAGCTGTTTGTGGTGCACGGTCTGAATCAGACCTGGTCGTTGCAGGGTGGGGCGACCTACCGCGAGAGTGGCATG
CGTGGGTTTTCCACCGAGCCGTGGACACTGCAAGCCGACCAGCGCACCTTGCGCCGCGAACGCCGTTACCGCGACTACCA
GGGCCGCGATATCGCTGCGCGTGCGGAGTTGCTCGGCAGCCTGCAGGCGGGCAGGGTCACGCATAATGTGTTGTTAGGCA
TCGACGGCAACCGCTTCGACGACAGCCGCTTTCAGCAACGTGCACGTTCCGCGGCGACGCCATACAGCATTGACGTGCTG
GCGCCGCGCTACGGTGTGGCGCAGCCGGGGCAGCTGGCTGCCATCACCGACACCGAAGAGCGCCAGCAGGTGTGGGGCGC
GTACGCGCAGGATCAGATCGATCTGGGCGCGCGCTGGAAAGCTTTGCTCGGCCTGCGCTACGATCACTACGAGCAAGACT
TGGACAACCACCTGCGGGGCACCACACAGCGCGCATCTGACGGCGTGGTGAGCCCGCGTGCGGGTCTGACCTTCCTTGTC
GACGATGCGCTCTCGCTGTATGCGAGTGCGGCAGCGGGCTTTCGCCCCAATAGCGGTGTCGGCGCTAACGGGCAAAGTTT
TGCGCCGGAAAAGAGCCGCTCGCTGGAGACCGGCTTGAAATACGTGCAGCCTGGCGATGGCCTGGAAGCCACAGTGGCTG
CGTTCCGCATCGACAAGAAAAACGTGTTGAGCCTGGACCCGGCCGACACCAGTTTTTCGTTGCCGGTGGGCGAAATGCGC
AGCCAAGGCGTAGAGCTGGACTTACTCGGCCGGCTCACCCCGCATCTGGCCGCATCGGTGGGCCTGGCCTACACCGATCC
GCAGGTGACGCGCAGCAGCGCGGCTGCCGCCGGCACCGGACTGGCGGAGGGCCGGCGGTTTCCGAATGTGTCGCGTTTCA
GCGGTAATGCGTTCTTGAATTACGAGCAGCCGTTGACCGGCAAACGTAGCGCTGCGATCGGAATGGGCGTGTCGCACACC
GGCGAACGGCTGGGTTCGGTCGATAGCAATACCGATTTTGTGCTGCCCGCTTATACCGTGTGGCGCGTGGTCGGCCATTA
CGATCTGAGCGACCGGCTACGCCTGTATGCCAAGGTCGAGAACCTGACCGACCGCCGCTACGCTGCATTTTCGTACAGCG
AGCAATGGGTGTATCCCGGTGCGCCGCGGAGCTGGACGGTGGGTGTGCATTTGCGGTTCTGA

Upstream 100 bases:

>100_bases
CTGCCTCATAGCGACAGCCGCGTTTCACCTCTCTTCACCTCTCTCTTTTTCACTTGCGACCCAGGCCTGCTGCGCCAAGG
TCTTTCAGGAGTTCTGCCCG

Downstream 100 bases:

>100_bases
TTTGCGCTCTAGTGCAAGCGGAGTCAGTGGTTGACACCCGTGCTGTGTGAGCCCTCCAGACAAGCACATGCTTGATCTGC
AGCTCTAACCGCGCCGCTTC

Product: ferrichrome-iron receptor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLL
DDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY
GRGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM
PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGM
RGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVL
APRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMR
SQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHT
GERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF

Sequences:

>Translated_713_residues
MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLL
DDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY
GRGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM
PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGM
RGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVL
APRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMR
SQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHT
GERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF
>Mature_712_residues
PVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLLD
DAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYG
RGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWMP
TPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGMR
GFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLA
PRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLVD
DALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMRS
QGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTG
ERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=708, Percent_Identity=24.4350282485876, Blast_Score=163, Evalue=4e-41,
Organism=Escherichia coli, GI1787024, Length=722, Percent_Identity=22.7146814404432, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787344, Length=773, Percent_Identity=23.4152652005175, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1790743, Length=614, Percent_Identity=23.2899022801303, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 77964; Mature: 77833

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCC
TDAPLRDLPISARVLDRTLLDDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP
CCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGVVNIITKKPLFQP
CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC
QNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM
CCCCCCCCCCCCHHHHHCCCCCCCCHHHEEEEEEEECCHHHHHHCCCCCCEEECCEEEEC
PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVV
CCCCCEEEEEEEEEEEECCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE
HGLNQTWSLQGGATYRESGMRGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGS
ECCCCEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGVAQPGQLAAITDTEE
HHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCHH
RQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV
HHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEH
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHEEEEEEECCC
NVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTG
CEEEECCCCCCCCCCHHHHHHCCCCEEEHHHCCHHHHHHCCCEECCCHHHHHHHHHCCCC
LAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTGERLGSVDSNTDFVLPAYTV
HHCCCCCCCCCEECCCEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEHHHHH
WRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF
HHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCEEEEEEEEC
>Mature Secondary Structure 
PVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCC
TDAPLRDLPISARVLDRTLLDDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP
CCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGVVNIITKKPLFQP
CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC
QNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM
CCCCCCCCCCCCHHHHHCCCCCCCCHHHEEEEEEEECCHHHHHHCCCCCCEEECCEEEEC
PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVV
CCCCCEEEEEEEEEEEECCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE
HGLNQTWSLQGGATYRESGMRGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGS
ECCCCEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGVAQPGQLAAITDTEE
HHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCHH
RQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV
HHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEH
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHEEEEEEECCC
NVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTG
CEEEECCCCCCCCCCHHHHHHCCCCEEEHHHCCHHHHHHCCCEECCCHHHHHHHHHCCCC
LAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTGERLGSVDSNTDFVLPAYTV
HHCCCCCCCCCEECCCEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEHHHHH
WRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF
HHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]