Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is fct [H]
Identifier: 84622233
GI number: 84622233
Start: 625761
End: 627902
Strand: Direct
Name: fct [H]
Synonym: XOO_0576
Alternate gene names: 84622233
Gene position: 625761-627902 (Clockwise)
Preceding gene: 84622232
Following gene: 84622238
Centisome position: 12.67
GC content: 64.24
Gene sequence:
>2142_bases ATGCCCGTTTTCTCGCGCCGCCGCATGCGGCATACGTTGCCCTTGCTCAGCCTGCTGGCCTGGGCCTGCAGCATTGCCTG CGCGCAGGCCGACGCGTTGCGGGCGCGCGAGCTGGATGCGGTGCAGGTGCGCAGCCAGTACACGCCGTATCGCGAACTGA GCATTACCGGCGCCACCAAGACCGATGCGCCGCTGCGTGATTTGCCGATCAGTGCGCGCGTGCTCGATCGGACCCTGCTG GACGATGCCGGCGTGACCGATCTGGCAGGCGCACTGGAGCTGGCCAGCGGCATCACCAAGGCCAACAACCTGGGCGGGCT CTGGGACAGCTATTCGATGCGCGGCTTCACCGGCGACCCGAATTTCAGTTCGGACTACATGGTCAACGGCTTCAATGCCA GCCGCGGTTACAACGGCCTGCGTGATGCGGCCAACACGCAGAGCATCGAAGTCATCAAAGGGCCGGCGTCGGCCTTGTAT GGCCGTGGCGAGCCGGGTGGGGTGGTCAACATCATCACCAAAAAGCCGCTGTTTCAGCCGCAGAACAGCGTGGATGTGTC GGCCGGTCGCTTCGACAGTTATCGCGCCGCGATCGATAGCACCGGCCCACTGAGCGAGAGCGTCGCTTACCGCTTGAACG TGATGCACAAGGATCAGCATAGCTTCCGCGACACTGTCGACAGCGATAACACCTTGCTGGCGCCGTCGCTGTTGTGGATG CCGACGCCCGAAACCACGGTGTCGTATGAGCTGGAAGCCGTGCGGATCCATGCGCCGTTCGATCGCGGCGTGACCGCCAT CGACGGCGATGCCAACCGGCTGCCGGCGTCGCGCTTTCTGGGCGAGCCGCGCGATGGCGACATCGATCTGCATTCCACCG GGCATCAGCTGTTTGTGGTGCACGGTCTGAATCAGACCTGGTCGTTGCAGGGTGGGGCGACCTACCGCGAGAGTGGCATG CGTGGGTTTTCCACCGAGCCGTGGACACTGCAAGCCGACCAGCGCACCTTGCGCCGCGAACGCCGTTACCGCGACTACCA GGGCCGCGATATCGCTGCGCGTGCGGAGTTGCTCGGCAGCCTGCAGGCGGGCAGGGTCACGCATAATGTGTTGTTAGGCA TCGACGGCAACCGCTTCGACGACAGCCGCTTTCAGCAACGTGCACGTTCCGCGGCGACGCCATACAGCATTGACGTGCTG GCGCCGCGCTACGGTGTGGCGCAGCCGGGGCAGCTGGCTGCCATCACCGACACCGAAGAGCGCCAGCAGGTGTGGGGCGC GTACGCGCAGGATCAGATCGATCTGGGCGCGCGCTGGAAAGCTTTGCTCGGCCTGCGCTACGATCACTACGAGCAAGACT TGGACAACCACCTGCGGGGCACCACACAGCGCGCATCTGACGGCGTGGTGAGCCCGCGTGCGGGTCTGACCTTCCTTGTC GACGATGCGCTCTCGCTGTATGCGAGTGCGGCAGCGGGCTTTCGCCCCAATAGCGGTGTCGGCGCTAACGGGCAAAGTTT TGCGCCGGAAAAGAGCCGCTCGCTGGAGACCGGCTTGAAATACGTGCAGCCTGGCGATGGCCTGGAAGCCACAGTGGCTG CGTTCCGCATCGACAAGAAAAACGTGTTGAGCCTGGACCCGGCCGACACCAGTTTTTCGTTGCCGGTGGGCGAAATGCGC AGCCAAGGCGTAGAGCTGGACTTACTCGGCCGGCTCACCCCGCATCTGGCCGCATCGGTGGGCCTGGCCTACACCGATCC GCAGGTGACGCGCAGCAGCGCGGCTGCCGCCGGCACCGGACTGGCGGAGGGCCGGCGGTTTCCGAATGTGTCGCGTTTCA GCGGTAATGCGTTCTTGAATTACGAGCAGCCGTTGACCGGCAAACGTAGCGCTGCGATCGGAATGGGCGTGTCGCACACC GGCGAACGGCTGGGTTCGGTCGATAGCAATACCGATTTTGTGCTGCCCGCTTATACCGTGTGGCGCGTGGTCGGCCATTA CGATCTGAGCGACCGGCTACGCCTGTATGCCAAGGTCGAGAACCTGACCGACCGCCGCTACGCTGCATTTTCGTACAGCG AGCAATGGGTGTATCCCGGTGCGCCGCGGAGCTGGACGGTGGGTGTGCATTTGCGGTTCTGA
Upstream 100 bases:
>100_bases CTGCCTCATAGCGACAGCCGCGTTTCACCTCTCTTCACCTCTCTCTTTTTCACTTGCGACCCAGGCCTGCTGCGCCAAGG TCTTTCAGGAGTTCTGCCCG
Downstream 100 bases:
>100_bases TTTGCGCTCTAGTGCAAGCGGAGTCAGTGGTTGACACCCGTGCTGTGTGAGCCCTCCAGACAAGCACATGCTTGATCTGC AGCTCTAACCGCGCCGCTTC
Product: ferrichrome-iron receptor 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLL DDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY GRGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGM RGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVL APRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMR SQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHT GERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF
Sequences:
>Translated_713_residues MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLL DDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY GRGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGM RGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVL APRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMR SQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHT GERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF >Mature_712_residues PVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLLD DAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYG RGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWMP TPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGMR GFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLA PRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLVD DALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMRS QGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTG ERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=708, Percent_Identity=24.4350282485876, Blast_Score=163, Evalue=4e-41, Organism=Escherichia coli, GI1787024, Length=722, Percent_Identity=22.7146814404432, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1787344, Length=773, Percent_Identity=23.4152652005175, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1790743, Length=614, Percent_Identity=23.2899022801303, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77964; Mature: 77833
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCC TDAPLRDLPISARVLDRTLLDDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP CCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGVVNIITKKPLFQP CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC QNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM CCCCCCCCCCCCHHHHHCCCCCCCCHHHEEEEEEEECCHHHHHHCCCCCCEEECCEEEEC PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVV CCCCCEEEEEEEEEEEECCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE HGLNQTWSLQGGATYRESGMRGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGS ECCCCEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGVAQPGQLAAITDTEE HHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCHH RQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV HHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEH DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHEEEEEEECCC NVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTG CEEEECCCCCCCCCCHHHHHHCCCCEEEHHHCCHHHHHHCCCEECCCHHHHHHHHHCCCC LAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTGERLGSVDSNTDFVLPAYTV HHCCCCCCCCCEECCCEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEHHHHH WRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF HHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCEEEEEEEEC >Mature Secondary Structure PVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCC TDAPLRDLPISARVLDRTLLDDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP CCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGVVNIITKKPLFQP CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC QNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWM CCCCCCCCCCCCHHHHHCCCCCCCCHHHEEEEEEEECCHHHHHHCCCCCCEEECCEEEEC PTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVV CCCCCEEEEEEEEEEEECCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE HGLNQTWSLQGGATYRESGMRGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGS ECCCCEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGVAQPGQLAAITDTEE HHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCHH RQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLV HHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEH DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHEEEEEEECCC NVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTG CEEEECCCCCCCCCCHHHHHHCCCCEEEHHHCCHHHHHHCCCEECCCHHHHHHHHHCCCC LAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTGERLGSVDSNTDFVLPAYTV HHCCCCCCCCCEECCCEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEHHHHH WRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF HHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]