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The map label for this gene is 84622207

Identifier: 84622207

GI number: 84622207

Start: 601676

End: 602953

Strand: Direct

Name: 84622207

Synonym: XOO_0550

Alternate gene names: NA

Gene position: 601676-602953 (Clockwise)

Preceding gene: 84622206

Following gene: 84622209

Centisome position: 12.18

GC content: 65.96

Gene sequence:

>1278_bases
ATGAATTCCTTGCCTACCCAACCTGCTTCGCTGTCGCCTTCTGCCCCGACGACCTCGCGGGCAGGCGTACGCATTGCCGA
GCTGGGCGCCTTCGCATTGACTGCGCTGGTGGTCAGCATGCCGAGCGGGCTGCTGCCGTTCGGTCTGTGCCTGCTGCTGG
GTTCGTTGGTGGGTGGGCGTCACCTGCGGGACGGCATTGCTGCGCGCGACTGGTCGTTGCGCGCAGTGGGCTGGCTGACG
GTGGCGGTGATTGCAATATCGTTGCTGTCGATTGCCTTGTTCGAACACGGGCTGCGCGATGTGGGCAACCGCTCGCGCTT
CCTGGTGCTGCCATGGGCGGCGCTGTGGGCGTATGCGTTGCAGCCGCGTCAGATATGGCTGTGGCGCGGCGCATTGGTCG
GTGTATTCGCGGCCATGTTGATCGCGCTGCTGCAGGTGATGAATGGTGCCGGTCGCGCCGAAGGCTTCACCAACGCCATT
GTGTTTGCCGACATCGCGCTGATGTTGTTGGTGGTGGGCGTGTTCTGCCGCCCGGATGGCAACGTGCGTTGGCTGTTGGG
CGCGGCGATCGCGACCGTGGTGGTGATCGTGCTGAGCGGCAGCCGTGGGGTGTTGTTGTCACTGCTGGCGACGCTGGGCG
TGCTGATCTGGGGTGCGCCTTGGCGTAGCGCACGCGTGCGCTTGCTGACCTTCATCGGCGGCCCGGTGCTGGCGGTGGGT
GTCGCACTCAGCGTGCCGGCCCTGACCGACCAGATGCGCCTGGGCGAATTACAGAGCGACCTGCAACGTTATGAAGTGGG
CGACACCGATTCGTCGGCTGGTGCACGTATCGAACGCCTGCATGTGGCTTGGGACACCCTGAAGGCGCATCCGTTGACCG
GTGTGGGCGTTGGTCGTTTCGACGATGCGATGCACGACCTGCCAGCCTGTGCCGCCGACCCGTCGTTGTTCCGTTGCCAG
TTGGGGCACGCGCACAACGATCTGGCCGAATGGAGTGCCACCCAGGGCGTGCCCGGCCTGTTGCTGCTGATCGCCGTCTA
CGGCGTGCCGCTGTGGGTGTTTGCGCGACTGCATCGGCGCAGCGGGCAGCAGCAGTTTCGCGGCCCGGCGGCGGCCGGGG
TGATGCTCGTGATCAGTTATGCCTTGTGCGGGCTGACCCAATCGATGTTCGCGCACCAGGTGGCGGCGAGCTTCTACACG
GCCATGGTCGGCGTGCTGGTGGGTCTGGCGGCGCGGCAGGCGCAACAGACCGAGCTGAGTGTGGCGAGCAGCCGGTAG

Upstream 100 bases:

>100_bases
CAGCAGCTGTCTAGCAGGGATTCATGCGTCGCATCGTTAGCTTGGCCGGCGTTGCCGAAGCCCGGCCACTGCGTTGCCTT
ACTTTTCCACCGATCTCTAG

Downstream 100 bases:

>100_bases
CGGCGGATGATCCATCCGCTGCATGTTGCGCATGCGCGAGCGGCATACGCTTCGAGTGGCTGATCAACGACATGCGCAGA
AGCAGAATGTGCAGCCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Ligase; Cell Surface Polysaccharide Polymerase/Ligase; O-Antigen Polymerase Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNSLPTQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLGSLVGGRHLRDGIAARDWSLRAVGWLT
VAVIAISLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQIWLWRGALVGVFAAMLIALLQVMNGAGRAEGFTNAI
VFADIALMLLVVGVFCRPDGNVRWLLGAAIATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVG
VALSVPALTDQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRFDDAMHDLPACAADPSLFRCQ
LGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRRSGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYT
AMVGVLVGLAARQAQQTELSVASSR

Sequences:

>Translated_425_residues
MNSLPTQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLGSLVGGRHLRDGIAARDWSLRAVGWLT
VAVIAISLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQIWLWRGALVGVFAAMLIALLQVMNGAGRAEGFTNAI
VFADIALMLLVVGVFCRPDGNVRWLLGAAIATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVG
VALSVPALTDQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRFDDAMHDLPACAADPSLFRCQ
LGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRRSGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYT
AMVGVLVGLAARQAQQTELSVASSR
>Mature_425_residues
MNSLPTQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLGSLVGGRHLRDGIAARDWSLRAVGWLT
VAVIAISLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQIWLWRGALVGVFAAMLIALLQVMNGAGRAEGFTNAI
VFADIALMLLVVGVFCRPDGNVRWLLGAAIATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVG
VALSVPALTDQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRFDDAMHDLPACAADPSLFRCQ
LGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRRSGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYT
AMVGVLVGLAARQAQQTELSVASSR

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45082; Mature: 45082

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLPTQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLGSLVGGR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
HLRDGIAARDWSLRAVGWLTVAVIAISLLSIALFEHGLRDVGNRSRFLVLPWAALWAYAL
HHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHC
QPRQIWLWRGALVGVFAAMLIALLQVMNGAGRAEGFTNAIVFADIALMLLVVGVFCRPDG
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NVRWLLGAAIATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVG
CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
VALSVPALTDQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRF
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
DDAMHDLPACAADPSLFRCQLGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRR
HHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYTAMVGVLVGLAARQAQQTELS
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VASSR
HHCCC
>Mature Secondary Structure
MNSLPTQPASLSPSAPTTSRAGVRIAELGAFALTALVVSMPSGLLPFGLCLLLGSLVGGR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
HLRDGIAARDWSLRAVGWLTVAVIAISLLSIALFEHGLRDVGNRSRFLVLPWAALWAYAL
HHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHC
QPRQIWLWRGALVGVFAAMLIALLQVMNGAGRAEGFTNAIVFADIALMLLVVGVFCRPDG
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NVRWLLGAAIATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVG
CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
VALSVPALTDQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRF
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
DDAMHDLPACAADPSLFRCQLGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRR
HHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGQQQFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYTAMVGVLVGLAARQAQQTELS
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VASSR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA