Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622209
Identifier: 84622209
GI number: 84622209
Start: 603979
End: 605034
Strand: Direct
Name: 84622209
Synonym: XOO_0552
Alternate gene names: NA
Gene position: 603979-605034 (Clockwise)
Preceding gene: 84622207
Following gene: 84622213
Centisome position: 12.23
GC content: 67.14
Gene sequence:
>1056_bases ATGGCCGAGTACCTGCTGTTCGCAACGGAGCGTTACGCGCTGCCTATTCTGGCGCCATTGGCGCAGGCATTACAGGCCTG CGGGCATGCGGTGTCGGCCTGGTTCGAAGGCGGTGCGCGCGGGCTGGCGCTGCCCGGCGTGCGTGAGGTCGGCCTGCGCG ATGCGCTGGTGTTGCGCCCGCGGGCGGTCTTCAGCGCGGCTAACTGGGTGCCGCCGTTTGTGTCGGGCGCGAAAGTGCAG CTGTTCCACGGTTTCAATGTGCAAAAGCGCGAAGACAACCGCGGCCATTTCCGCGTGCGGGGTTTGTTCGATCTGTATTG CACGCAAGGCCCGGCCACCACCGCGCCGTTCCGCGCGCTGGCGCAGCGCGAGGGCCATTTTGCGGTGGTGGAAACCGGCT GGCCCAAGCTCGACCCGGTCTTTCGCGACGATGGTGGGCGCAGCGCCGCCCTGCGCGCGCCAGCGAACGGGCGGCCGGTG ATCCTGTTCGGCTCCACCTTCACCGAGAGGCTGAGCGCGGGGCCTGCGCTCTTGGATGAAATCGCCGCCGACATCGCGCG CGGTGCGCATTACTGGCTGCTGACCTTGCACCCGAAATGCGCTCCGGCGTTGTTCGATCGCTATCGCGCACTGGCAGGCG CCAACGCACGCTTCATCGAGCCCGAAGAAGTCATGGCGGCGCAGCGTGCGGCCGAGGTATTGCTCTCGGATACCTCATCG ATCGTGTCCGAGTTCGTGGTGCAGCACAAACCGGTGGTGACCTTTCGCAACCGCGTGCCGCAGCCGCACATGCTCGACTT CCAACAGGCCGAGCAGTTGCCGCAGCAGCTGGTGCGCGCGCTGGCGCCGGATGCGGCATTGCGCAGCGCACTTGCCAGCT ACGCAGATGCGATTCACCCGTATCGCGACGGGCAGTCTTCCGAGCGGGTGATCGCCGCGACCGAAGACTTCATCGCCGGC AAGCTCGGCGGACTGCGCCGCAAACCGCTGGGTGCGGTGTGGCGTGGGTTGCAGATCCGTCGCGAGTTGGGCTACTGGGG ACCGGCGCAACGCTGA
Upstream 100 bases:
>100_bases GCGAGGTCAGACAGTTGCGTAGGCGATCGGCCTCGTTGAACGCGATAATGCAGGCACTGATGCGAGGCCGTTCGTTGGGT GCGGTCGAAGAGGACATGTG
Downstream 100 bases:
>100_bases GCACGATCCGCCGTATCGAGCGCGGGGGTGATGATCGGCGACGCCTTGCCGAACGTGGTCGTCGTCATTGAATTGAGCAG TGCAATCGCTCGCGTTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MAEYLLFATERYALPILAPLAQALQACGHAVSAWFEGGARGLALPGVREVGLRDALVLRPRAVFSAANWVPPFVSGAKVQ LFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRALAQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPANGRPV ILFGSTFTERLSAGPALLDEIAADIARGAHYWLLTLHPKCAPALFDRYRALAGANARFIEPEEVMAAQRAAEVLLSDTSS IVSEFVVQHKPVVTFRNRVPQPHMLDFQQAEQLPQQLVRALAPDAALRSALASYADAIHPYRDGQSSERVIAATEDFIAG KLGGLRRKPLGAVWRGLQIRRELGYWGPAQR
Sequences:
>Translated_351_residues MAEYLLFATERYALPILAPLAQALQACGHAVSAWFEGGARGLALPGVREVGLRDALVLRPRAVFSAANWVPPFVSGAKVQ LFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRALAQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPANGRPV ILFGSTFTERLSAGPALLDEIAADIARGAHYWLLTLHPKCAPALFDRYRALAGANARFIEPEEVMAAQRAAEVLLSDTSS IVSEFVVQHKPVVTFRNRVPQPHMLDFQQAEQLPQQLVRALAPDAALRSALASYADAIHPYRDGQSSERVIAATEDFIAG KLGGLRRKPLGAVWRGLQIRRELGYWGPAQR >Mature_350_residues AEYLLFATERYALPILAPLAQALQACGHAVSAWFEGGARGLALPGVREVGLRDALVLRPRAVFSAANWVPPFVSGAKVQL FHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRALAQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPANGRPVI LFGSTFTERLSAGPALLDEIAADIARGAHYWLLTLHPKCAPALFDRYRALAGANARFIEPEEVMAAQRAAEVLLSDTSSI VSEFVVQHKPVVTFRNRVPQPHMLDFQQAEQLPQQLVRALAPDAALRSALASYADAIHPYRDGQSSERVIAATEDFIAGK LGGLRRKPLGAVWRGLQIRRELGYWGPAQR
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38488; Mature: 38356
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYLLFATERYALPILAPLAQALQACGHAVSAWFEGGARGLALPGVREVGLRDALVLRP CCCEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHCCC RAVFSAANWVPPFVSGAKVQLFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRAL HHHHHHCCCCCCCCCCCEEEEEECCCCEECCCCCCEEEEEEEEEEEECCCCCCCHHHHHH AQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPANGRPVILFGSTFTERLSAGPALLDE HHCCCCEEEEECCCCCCCCCEECCCCCCEEEECCCCCCEEEEECCHHHHHHCCCHHHHHH IAADIARGAHYWLLTLHPKCAPALFDRYRALAGANARFIEPEEVMAAQRAAEVLLSDTSS HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH IVSEFVVQHKPVVTFRNRVPQPHMLDFQQAEQLPQQLVRALAPDAALRSALASYADAIHP HHHHHHHHCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC YRDGQSSERVIAATEDFIAGKLGGLRRKPLGAVWRGLQIRRELGYWGPAQR CCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AEYLLFATERYALPILAPLAQALQACGHAVSAWFEGGARGLALPGVREVGLRDALVLRP CCEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHCCC RAVFSAANWVPPFVSGAKVQLFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRAL HHHHHHCCCCCCCCCCCEEEEEECCCCEECCCCCCEEEEEEEEEEEECCCCCCCHHHHHH AQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPANGRPVILFGSTFTERLSAGPALLDE HHCCCCEEEEECCCCCCCCCEECCCCCCEEEECCCCCCEEEEECCHHHHHHCCCHHHHHH IAADIARGAHYWLLTLHPKCAPALFDRYRALAGANARFIEPEEVMAAQRAAEVLLSDTSS HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH IVSEFVVQHKPVVTFRNRVPQPHMLDFQQAEQLPQQLVRALAPDAALRSALASYADAIHP HHHHHHHHCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC YRDGQSSERVIAATEDFIAGKLGGLRRKPLGAVWRGLQIRRELGYWGPAQR CCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA