Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622154
Identifier: 84622154
GI number: 84622154
Start: 542454
End: 543068
Strand: Direct
Name: 84622154
Synonym: XOO_0497
Alternate gene names: NA
Gene position: 542454-543068 (Clockwise)
Preceding gene: 84622149
Following gene: 84622156
Centisome position: 10.98
GC content: 70.08
Gene sequence:
>615_bases ATGGCGGCTGCGTTCAGCGGGCCAGACGTGCCGGCGCCTTGGGGTGCGGGCCAGCTGGGCACGCAGCAAGGCGACGAAGG CGCGCGCGGCCGGGCTGGGGTCGGGCCGCCACACCGCGTAGGTCAGACACCGGTAACGCTCTTTCAACGCGAACGTGATC ACGCCGCGCATGGCGCCGGCCATGGTCTGCGGGATGATGCCCACACCCAGGTCGGCAGCGACCAGTTCGCGCACCAGATC GGCATGGGTCACTTCGTAATGCTGGCGCTGCCGCAGGCCGGCCTGGGCAAAGGCAGCATCGAGGATGCCGCGCACGCCGG CACCGGCAATCAGCCCGGTCATCGGTTCATCGTCCAGCTCGGCCAGTGCCACCCGTTTGCGCGTGGCAAAGCGGTGGCCG GGGGCCACGATCAAGGCCAGCGCCTCTTCATGCAGCAGCAGGCGCTGCGCCGGCACCGCGACCTGTGGACCCACGCCGAC CAGAGCGACATCCAGCCCGGCCTTCGCCCAGATCGTGCAGCAAGGCCTCGCGCATGGCGGTGCACAGGTGCACGTCCACA CGCGCATGCGCGCTGCGGAACTGATGCAGTCACCCCGGCAGCTGCACGGTGGTGA
Upstream 100 bases:
>100_bases GAAGCGGCGCTGCCTGAGCAGGGCGAACTGACTGTGACCGGACATGCAGATTCCTTTGCGAACGCGCGCAGCCTAGCAGG CTTCCACGGCGTGCTGGTGG
Downstream 100 bases:
>100_bases GCGAGGAGATCTGCGCCAATGCGAGCCGCCCGCGCACGGTGCCCAGGGCTTGCGCCATTTCCTCGTGCAGGCGCTCGGCC GCGCGCAGGGTCTGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAAAFSGPDVPAPWGAGQLGTQQGDEGARGRAGVGPPHRVGQTPVTLFQRERDHAAHGAGHGLRDDAHTQVGSDQFAHQI GMGHFVMLALPQAGLGKGSIEDAAHAGTGNQPGHRFIVQLGQCHPFARGKAVAGGHDQGQRLFMQQQALRRHRDLWTHAD QSDIQPGLRPDRAARPRAWRCTGARPHAHARCGTDAVTPAAARW
Sequences:
>Translated_204_residues MAAAFSGPDVPAPWGAGQLGTQQGDEGARGRAGVGPPHRVGQTPVTLFQRERDHAAHGAGHGLRDDAHTQVGSDQFAHQI GMGHFVMLALPQAGLGKGSIEDAAHAGTGNQPGHRFIVQLGQCHPFARGKAVAGGHDQGQRLFMQQQALRRHRDLWTHAD QSDIQPGLRPDRAARPRAWRCTGARPHAHARCGTDAVTPAAARW >Mature_203_residues AAAFSGPDVPAPWGAGQLGTQQGDEGARGRAGVGPPHRVGQTPVTLFQRERDHAAHGAGHGLRDDAHTQVGSDQFAHQIG MGHFVMLALPQAGLGKGSIEDAAHAGTGNQPGHRFIVQLGQCHPFARGKAVAGGHDQGQRLFMQQQALRRHRDLWTHADQ SDIQPGLRPDRAARPRAWRCTGARPHAHARCGTDAVTPAAARW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21690; Mature: 21559
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAFSGPDVPAPWGAGQLGTQQGDEGARGRAGVGPPHRVGQTPVTLFQRERDHAAHGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCC HGLRDDAHTQVGSDQFAHQIGMGHFVMLALPQAGLGKGSIEDAAHAGTGNQPGHRFIVQL CCCCCCHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHH GQCHPFARGKAVAGGHDQGQRLFMQQQALRRHRDLWTHADQSDIQPGLRPDRAARPRAWR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEE CTGARPHAHARCGTDAVTPAAARW ECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAAFSGPDVPAPWGAGQLGTQQGDEGARGRAGVGPPHRVGQTPVTLFQRERDHAAHGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCC HGLRDDAHTQVGSDQFAHQIGMGHFVMLALPQAGLGKGSIEDAAHAGTGNQPGHRFIVQL CCCCCCHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHH GQCHPFARGKAVAGGHDQGQRLFMQQQALRRHRDLWTHADQSDIQPGLRPDRAARPRAWR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEE CTGARPHAHARCGTDAVTPAAARW ECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA