Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622149
Identifier: 84622149
GI number: 84622149
Start: 538013
End: 538903
Strand: Direct
Name: 84622149
Synonym: XOO_0492
Alternate gene names: NA
Gene position: 538013-538903 (Clockwise)
Preceding gene: 84622148
Following gene: 84622154
Centisome position: 10.89
GC content: 66.89
Gene sequence:
>891_bases ATGTTCACCACCCTGGTAGCCGTCGTCGTCGCACTCACGCTGGGCCATCTGGTGCCGACGCAGGTGGCCAGGCTCCGCAC TTTCGCCTGGTTCGGACAATGGTTGCGTCGGCTGGACAGTTACGCGGCCGGGCGCGGTGCGTGGCAAGGCCGCTGTGGCG TGCTGCTGGCTGTGCTGCCGGCGTTGCTGGTATTGCTGGTGCAGTGGCTGCTGGACGATGTCTGGCACGGCTTTCTGGAC TTGCTGTTCGGCGTGGCGGTGCTGGCCTGGACCTGGGGCCCGCGCGATCTGGATCGCGATGTGGAAGCGGTGATCGATGC CGACGAGCCGCACGCGCGGCGCGAGGCGATTTCACACCTGCAGGCCGCCGGCGGCAGCATGCATGAAGACGCGCCGTCGC TGGTGGAAGCGGTGGTGGTCAATGGCCTGCGGCGCTGGTTTGCGGTGCTGTGGTGGTTTCTGCTGCTGGGGCCGTTCGGC GCGGTGTTGTACCGGCTGACTGCATTAGCGGTAGAGAGCCCGCTGGCGGTCTTGCTGCCGCCCCGCAATCTGGCCGGCGC ACGTTGGCTGCTGGCGGTGCTGGAATGGCCGGTGGCGCAGCTGATGACGATGTCGATGGCGCTGGTGGGCAATTTCGACA CCGTGTTCCGCGCCTGGCGCGAAGCGCATGGCAACCGCTGGTTGCTGGAACCGCATTTTCTCGGTGCTGTGGCGCGTGCC AGCGTCAGCGCAGAGCTGCGCGAAGAAGCGCACGACTACACCGATTCGGGGCTGGTACCCGTCTGGCGCCGCCTGCCGGA AGTGCGCGACGCAATGAGCCTGATCTGGCGCGTGCTGCTGCTGTGGTTGGTGGTGCTGGCGTTGCTGGTGATTGCTGGGT GGGTGCGTTAG
Upstream 100 bases:
>100_bases GAGCACTGGCATCGCACGCATGGCTGAGCCTGGGAGGTTGTTGCAGCGTTGCAGCGGTGCTTGCGTCCCCTCGGCTAGAC TCGGCTGAGGAGGCCCACCC
Downstream 100 bases:
>100_bases TGCCTGTTCGGTCTGTGCCGGAACGTTGAAGCAGCACCGATCAGATGTCAGGCGTGATGGTGTTGCATGCAACCTATGCC AATCGCTGTAATGCGATTTG
Product: transmembrane protein
Products: NA
Alternate protein names: Signaling Modulator Of AmpD AmpE
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MFTTLVAVVVALTLGHLVPTQVARLRTFAWFGQWLRRLDSYAAGRGAWQGRCGVLLAVLPALLVLLVQWLLDDVWHGFLD LLFGVAVLAWTWGPRDLDRDVEAVIDADEPHARREAISHLQAAGGSMHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFG AVLYRLTALAVESPLAVLLPPRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWREAHGNRWLLEPHFLGAVARA SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLIWRVLLLWLVVLALLVIAGWVR
Sequences:
>Translated_296_residues MFTTLVAVVVALTLGHLVPTQVARLRTFAWFGQWLRRLDSYAAGRGAWQGRCGVLLAVLPALLVLLVQWLLDDVWHGFLD LLFGVAVLAWTWGPRDLDRDVEAVIDADEPHARREAISHLQAAGGSMHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFG AVLYRLTALAVESPLAVLLPPRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWREAHGNRWLLEPHFLGAVARA SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLIWRVLLLWLVVLALLVIAGWVR >Mature_296_residues MFTTLVAVVVALTLGHLVPTQVARLRTFAWFGQWLRRLDSYAAGRGAWQGRCGVLLAVLPALLVLLVQWLLDDVWHGFLD LLFGVAVLAWTWGPRDLDRDVEAVIDADEPHARREAISHLQAAGGSMHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFG AVLYRLTALAVESPLAVLLPPRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWREAHGNRWLLEPHFLGAVARA SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLIWRVLLLWLVVLALLVIAGWVR
Specific function: Unknown
COG id: COG3725
COG function: function code V; Membrane protein required for beta-lactamase induction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33174; Mature: 33174
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTTLVAVVVALTLGHLVPTQVARLRTFAWFGQWLRRLDSYAAGRGAWQGRCGVLLAVLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ALLVLLVQWLLDDVWHGFLDLLFGVAVLAWTWGPRDLDRDVEAVIDADEPHARREAISHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QAAGGSMHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFGAVLYRLTALAVESPLAVLLP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC PRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWREAHGNRWLLEPHFLGAVARA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECHHHHHHHHHH SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLIWRVLLLWLVVLALLVIAGWVR HHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTTLVAVVVALTLGHLVPTQVARLRTFAWFGQWLRRLDSYAAGRGAWQGRCGVLLAVLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ALLVLLVQWLLDDVWHGFLDLLFGVAVLAWTWGPRDLDRDVEAVIDADEPHARREAISHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QAAGGSMHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFGAVLYRLTALAVESPLAVLLP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC PRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWREAHGNRWLLEPHFLGAVARA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECHHHHHHHHHH SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLIWRVLLLWLVVLALLVIAGWVR HHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA