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The map label for this gene is ygaY [H]

Identifier: 84622156

GI number: 84622156

Start: 543718

End: 544659

Strand: Direct

Name: ygaY [H]

Synonym: XOO_0499

Alternate gene names: 84622156

Gene position: 543718-544659 (Clockwise)

Preceding gene: 84622154

Following gene: 84622164

Centisome position: 11.01

GC content: 66.24

Gene sequence:

>942_bases
GTGGGCTTGTTCGTGCTCAGCGCGCTCGGCCTGCTGGTCAGAGCCAGTTCGCACAGTTTTGCGATGTTGCTGGTCGGCAC
GATCGTGACCGGCGCCAGCTCGGTGGCTGTGCAGATCCTGGTGCCATTTGCCGCCACGCTGGCCGCGCCCAACGAGCGTG
GCCGGGTGATCGGCACGGTGATGAGCGGGTTGTTGCTGGGCATCCTGCTGGCGCGCGCCGTGGCCGGCGTGCTCGCCGGT
GTCGGTGGCTGGCATACGGTGTACTGGATCGCCTCGGGTGCGTTATTGCTCACCGCCGGGTTGTTGTGGCGCGGGTTGCC
GCGCCATCCGGTCAATGCGCAACTGGCGTACCCGCAGTTGGTGGCCTCGGTGCTGAGGCTGCTGCGCGACGATGCGGTGC
TGCGTTCGCGCTCGGTACTGGGCGGGCTGATCTTTGCCGGCTTCAGCATGTTCTGGACCACGCTGGCGTTTCTGTTGTCC
GGGCCGAGCTATGGCTATGGCACGGCGGTGATCGGCTTGTTCGGCCTGATCGGTGCGGCCGGTGCGCTGGCCGCCAATCG
CTCCGGGCATTGGTCCGATCACGGTCATGGCGACCGCGTGAGCTGCGGCGGGCTGGTGATGTTGCTGCTGTCGTGGGGCC
TGCTGGCGTTTGCGCCGCACTCGATCGCACTGCTGATCGTCGGCGTGCTGCTGGATATCGCGGTGCAGGGCGTGCATATC
GCCAATCAAAGCGTGATCTATCAGCGCAATCCGACTGCGCGCAATCGCATCACCTCCGCTTACATCACTTGCTACTTCAT
CGGTGGTGCGGTGGGCTCGACCCTGGGCACGGCAGCGTATGCGCAGGCCGGCTGGATGGGTGTGGTGATCGTCGGCGCCG
TGCTTGCTGCAGCAGCGCTGGGTTGGGTGGCGCTGAGCGTGGCGCGCAAGCAGTGGAAGTGA

Upstream 100 bases:

>100_bases
GCGCCGGTGCGGTGGTCACGGCCGCGCAGCTGGCTTATGCGGCGGGGTTGCTGTTGCTGGGGTGCCACTGGGCGACCGGC
TGGAGCGGCGCGGCCTGATC

Downstream 100 bases:

>100_bases
GCGTGGCTGAGGAAAGCGACGGGACGCTTCAACCGGTATGGCGCTTGCCCGGGATTGCAGCACTCGGCATCGCATTGCGC
ATGGATACCGCATCGTCAGC

Product: arabinose efflux permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGLFVLSALGLLVRASSHSFAMLLVGTIVTGASSVAVQILVPFAATLAAPNERGRVIGTVMSGLLLGILLARAVAGVLAG
VGGWHTVYWIASGALLLTAGLLWRGLPRHPVNAQLAYPQLVASVLRLLRDDAVLRSRSVLGGLIFAGFSMFWTTLAFLLS
GPSYGYGTAVIGLFGLIGAAGALAANRSGHWSDHGHGDRVSCGGLVMLLLSWGLLAFAPHSIALLIVGVLLDIAVQGVHI
ANQSVIYQRNPTARNRITSAYITCYFIGGAVGSTLGTAAYAQAGWMGVVIVGAVLAAAALGWVALSVARKQWK

Sequences:

>Translated_313_residues
MGLFVLSALGLLVRASSHSFAMLLVGTIVTGASSVAVQILVPFAATLAAPNERGRVIGTVMSGLLLGILLARAVAGVLAG
VGGWHTVYWIASGALLLTAGLLWRGLPRHPVNAQLAYPQLVASVLRLLRDDAVLRSRSVLGGLIFAGFSMFWTTLAFLLS
GPSYGYGTAVIGLFGLIGAAGALAANRSGHWSDHGHGDRVSCGGLVMLLLSWGLLAFAPHSIALLIVGVLLDIAVQGVHI
ANQSVIYQRNPTARNRITSAYITCYFIGGAVGSTLGTAAYAQAGWMGVVIVGAVLAAAALGWVALSVARKQWK
>Mature_312_residues
GLFVLSALGLLVRASSHSFAMLLVGTIVTGASSVAVQILVPFAATLAAPNERGRVIGTVMSGLLLGILLARAVAGVLAGV
GGWHTVYWIASGALLLTAGLLWRGLPRHPVNAQLAYPQLVASVLRLLRDDAVLRSRSVLGGLIFAGFSMFWTTLAFLLSG
PSYGYGTAVIGLFGLIGAAGALAANRSGHWSDHGHGDRVSCGGLVMLLLSWGLLAFAPHSIALLIVGVLLDIAVQGVHIA
NQSVIYQRNPTARNRITSAYITCYFIGGAVGSTLGTAAYAQAGWMGVVIVGAVLAAAALGWVALSVARKQWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 32347; Mature: 32215

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFVLSALGLLVRASSHSFAMLLVGTIVTGASSVAVQILVPFAATLAAPNERGRVIGTV
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MSGLLLGILLARAVAGVLAGVGGWHTVYWIASGALLLTAGLLWRGLPRHPVNAQLAYPQL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
VASVLRLLRDDAVLRSRSVLGGLIFAGFSMFWTTLAFLLSGPSYGYGTAVIGLFGLIGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GALAANRSGHWSDHGHGDRVSCGGLVMLLLSWGLLAFAPHSIALLIVGVLLDIAVQGVHI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCEEE
ANQSVIYQRNPTARNRITSAYITCYFIGGAVGSTLGTAAYAQAGWMGVVIVGAVLAAAAL
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GWVALSVARKQWK
HHHHHHHHHHHCC
>Mature Secondary Structure 
GLFVLSALGLLVRASSHSFAMLLVGTIVTGASSVAVQILVPFAATLAAPNERGRVIGTV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH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HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]