Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622147
Identifier: 84622147
GI number: 84622147
Start: 535462
End: 536742
Strand: Direct
Name: 84622147
Synonym: XOO_0490
Alternate gene names: NA
Gene position: 535462-536742 (Clockwise)
Preceding gene: 84622145
Following gene: 84622148
Centisome position: 10.84
GC content: 60.73
Gene sequence:
>1281_bases ATGTTGCACATCAACTCCCGATCAGCGTTTGGCCTGGCGGCCATGTTGGGTATCGCCAGCGCAGTGCTCGCACCCAGCGC GCAGGCAGCACCCGCGCGCGGCACCTTGCTCACCAGCAATTTCCTGACCAGCTATACCCGCGATGCGATCAGCGCAATGC TTGCCTCTGGCTCGCAGCCTGCCTCTGGCTCGCAGCCTGAGCAGGCCAAATGTAATGTCAGGGTTGCCGAATTCACCTAT GCAACCATCGGTGTCGAGGGCGAACCGGCCACCGCATCTGGCGTGCTGCTGATTCCGGGTGGCGAGCGGTGTAGCGGGCC GTATCCGTTATTGGGCTGGGGGCATCCGACCGAAGCGTTGCGCGCTCAGGAGCAGGCCAAGGAGATCCGCGATGCGAAGG GCGACGACCCGTTGGTTACGCGGCTCGCCAGCCAGGGGTATGTCGTCGTCGGCAGCGATTATCTGGGGCTTGGTAAATCC AATTATGCGTATCATCCGTACTTGCACAGCGCGAGCGAGGCGAGTGCGACCATCGATGCGATGCGCGCGGCGCGCAGCGT TTTGCAGCATTTGAAGACGCCGCTTTCGGGCAAGGTCATGCTGTCGGGTTATTCGCAGGGCGGCCACACTGCAATGGCCA CCCAGCGCGAGATAGAAGCGCATCTGTCCAAGGAATTCCATCTGGTGGCCAGCGCTCCGATCTCCGGGCCGTATGCGCTA GAGCAAACATTCCTGGATAGCTGGAGCGGCAGCAATGCGGTCGGCGAAAACACGTTCGGTATCCTTCTGGGAAGCTATGC CATCGTCGCGATGCAGCACACCTACAAGAACATCTATCTGGAGCCCGGACAGGTGTTTCAGGATCCGTGGGCTGCCAAAG TGGAGCCCTTGTTCCCGGGCAAGCAAAGCCTGACCGATATGTTTCTTAACGACACCTTGCCAAGCATCGATAAAGTCAAG TCGTATTTCCAGCCTGGCTTCTACAGCGACTTCCCCAGCAACCCGGCCAACCCGTTCCGCCAGGATCTGGCGCGCAACAA TCTGCTGGAGTGGGCGCCGCAAACCCCGACCTTGCTGTGCGGTTCGTCCAACGATGCCACTGTCCCGCTCAAGAATGCGC AGACCGCGATCGCCAGCTTCCAGCAGCGCGGCAGCAACCAGGTGGCGTTGGTGGATACCGGCACCGGCAACGCCAGCGAC AACTCGGCCTTCGCCCATATGTTGACGAAAGAATCGTGCATCGTGGTGGTGCGGGATCAGCTGTTGGACAAGCAGCGCTG A
Upstream 100 bases:
>100_bases CTAAGTTCTCCCGCACGTTCGATCGGGCAGCCGATGCCGATCTTGCGTCGCGTGAGTGTCTCCTGCCCGTTCCGTCCTTC CACAAGAGAGCATCACCTCA
Downstream 100 bases:
>100_bases TACAGCGGTCGTTGCTTGACCCCGCCGAAGGGTTTGCAGGTGTGGGCGTATCCCAAGCCCGCACCTGCATGGTTCTTCAC TGCAACCGGTGCAGTGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MLHINSRSAFGLAAMLGIASAVLAPSAQAAPARGTLLTSNFLTSYTRDAISAMLASGSQPASGSQPEQAKCNVRVAEFTY ATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKS NYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL EQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPGKQSLTDMFLNDTLPSIDKVK SYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQRGSNQVALVDTGTGNASD NSAFAHMLTKESCIVVVRDQLLDKQR
Sequences:
>Translated_426_residues MLHINSRSAFGLAAMLGIASAVLAPSAQAAPARGTLLTSNFLTSYTRDAISAMLASGSQPASGSQPEQAKCNVRVAEFTY ATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKS NYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL EQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPGKQSLTDMFLNDTLPSIDKVK SYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQRGSNQVALVDTGTGNASD NSAFAHMLTKESCIVVVRDQLLDKQR >Mature_426_residues MLHINSRSAFGLAAMLGIASAVLAPSAQAAPARGTLLTSNFLTSYTRDAISAMLASGSQPASGSQPEQAKCNVRVAEFTY ATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKS NYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL EQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPGKQSLTDMFLNDTLPSIDKVK SYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQRGSNQVALVDTGTGNASD NSAFAHMLTKESCIVVVRDQLLDKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45476; Mature: 45476
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHINSRSAFGLAAMLGIASAVLAPSAQAAPARGTLLTSNFLTSYTRDAISAMLASGSQP CEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC ASGSQPEQAKCNVRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEAL CCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHH RAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDA HHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCEECCCCCCCEECCCCCCCCHHHHHHHH MRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH EQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPG HHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEHHHHCEEEECCCHHHCCCCCCCCCCCCCC KQSLTDMFLNDTLPSIDKVKSYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQTPTLLC HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCEEEE GSSNDATVPLKNAQTAIASFQQRGSNQVALVDTGTGNASDNSAFAHMLTKESCIVVVRDQ CCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEHH LLDKQR HHCCCC >Mature Secondary Structure MLHINSRSAFGLAAMLGIASAVLAPSAQAAPARGTLLTSNFLTSYTRDAISAMLASGSQP CEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC ASGSQPEQAKCNVRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEAL CCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHH RAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDA HHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCEECCCCCCCEECCCCCCCCHHHHHHHH MRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH EQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPG HHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEHHHHCEEEECCCHHHCCCCCCCCCCCCCC KQSLTDMFLNDTLPSIDKVKSYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQTPTLLC HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCEEEE GSSNDATVPLKNAQTAIASFQQRGSNQVALVDTGTGNASDNSAFAHMLTKESCIVVVRDQ CCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEHH LLDKQR HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA