Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is erpA [H]
Identifier: 84622145
GI number: 84622145
Start: 534149
End: 534535
Strand: Direct
Name: erpA [H]
Synonym: XOO_0488
Alternate gene names: 84622145
Gene position: 534149-534535 (Clockwise)
Preceding gene: 84622144
Following gene: 84622147
Centisome position: 10.81
GC content: 62.02
Gene sequence:
>387_bases ATGAGTACGCTCGTTTCCCTTCCCACCGCCGCCCCGGCACCGGACTACCAGTCCATCGACCGGCCACTGCACTTTTCCGT GGCCGCCGCTGCCAAGGTGCGCGAGCTGATCCAGGAAGAAGGCAATGCCGACCTGGCATTGCGTGTGTATATCCAGGGCG GCGGGTGTTCCGGCTTCCAGTACGGTTTCGAGTTCGACGAGAACCGTGCCGAGGACGACCTTGCCGTGGTTACCGATGGC GTGACGCTGCTGGTGGATCCGCTGAGCCTGCAATACCTGATGGGCGCCGAGGTGGATTACACCGAAAGCCTGACCGGCGC GCAGTTCGTGATCCGCAATCCCAATGCGAAAACCACGTGTGGGTGCGGGAGCAGCTTCAGCGTTTAA
Upstream 100 bases:
>100_bases GCTACAGGCTGAAATCGCCGACGTCTGACTAGAGCGTGCGCGGTGAACGTCCCCGCAGCCATGGCTTGAAGTGGGAACGT CTGGCCCCCATGCTTACGGC
Downstream 100 bases:
>100_bases CCGCGTGTGTGGATGCGTGCCGATCGCTGGCGAATCACCCGTGTTCCGGCATGGCCGCTGTTGCGATGAAAGCTCGATTC TTGCGCGTGAGATCGAGCGC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSTLVSLPTAAPAPDYQSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAEDDLAVVTDG VTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFSV
Sequences:
>Translated_128_residues MSTLVSLPTAAPAPDYQSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAEDDLAVVTDG VTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFSV >Mature_127_residues STLVSLPTAAPAPDYQSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAEDDLAVVTDGV TLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=32.0754716981132, Blast_Score=80, Evalue=5e-16, Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=44.578313253012, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=62.6168224299065, Blast_Score=147, Evalue=2e-37, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=35.8490566037736, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=33.0188679245283, Blast_Score=64, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=34.9056603773585, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193209025, Length=111, Percent_Identity=34.2342342342342, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71998452, Length=111, Percent_Identity=36.9369369369369, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323001, Length=82, Percent_Identity=37.8048780487805, Blast_Score=72, Evalue=3e-14, Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=35.8490566037736, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=46.9879518072289, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13656; Mature: 13525
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLVSLPTAAPAPDYQSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQ CCCEECCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC YGFEFDENRAEDDLAVVTDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTC CCCCCCCCCCCCCEEEEECCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCEE GCGSSFSV CCCCCCCC >Mature Secondary Structure STLVSLPTAAPAPDYQSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQ CCEECCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC YGFEFDENRAEDDLAVVTDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTC CCCCCCCCCCCCCEEEEECCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCEE GCGSSFSV CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]