Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622044
Identifier: 84622044
GI number: 84622044
Start: 419535
End: 421136
Strand: Direct
Name: 84622044
Synonym: XOO_0387
Alternate gene names: NA
Gene position: 419535-421136 (Clockwise)
Preceding gene: 84622043
Following gene: 84622045
Centisome position: 8.49
GC content: 63.8
Gene sequence:
>1602_bases ATGGAGGGCCGCATGTTCGAGCGAGTGAGTCAGGCAGGGTGCATGGAAACGCGTGTGGTACGCGCGCAGCAATGGCGAGG ACGGCGAGCGCTGCCGCTGTTGATCGGCAGCGTCTGGGTGCTCAATTGCACGGCCGCCGAAGCGCCGCTCACATCAACAC AGACACGCTGGCTGCAACGCGCCACCTACGGTGTGGACGCCAACAGCGCGACGCAACTGACACAGCTAGGCCCCAAACGC TTCGGTGCGCTGTTATTGCAGCCCAGCGACGACGCGGCGTTGCCGGCGCCGGTACGCGTGCAGCTGCAGCGCTTCGATGG GCTGCATACCACTCTGGTGGATTTGCTGACCCAATACGAGGCCGACAAGGTCCGCCTGCAGGCCATGCCCGATGGCGATG AGAAGGTTGCCCTGAAGAAGGACTGGCAGGCGCGCGGCGGGCAGATGTTGGTGCAGGCGCGCCAGGCGCAATTGCTGCGC GCGGTGTACGCGCCGGATCAGCTGCGCGAGCAACTGGTGTGGTTCTGGCTTAATCATTTCAGCGTGTATGCCGACAAGGC GCGGGTGAAATGGATGGCCGCCGACTACATGGAAAACGCGATTCGCCCCAATGCCACCGGCAAGTTTGTCGACTTGGTGA TGGCCACGCTGGAAAGCCCGGCGATGCTGGAATACTTGGACAATGCCAAGAGCGCCAAGGGCAAGGTCAACGAAAACTAC GCACGCGAGTTGATGGAACTGCACACGCTGGGGGTGCATGGCGGCTACAGCCAGCAGGACGTGCAGCAGCTGGCGCTGAT CCTCACCGGCGCAGGCTTGGTGCCGATCAAGGCCAACGGCGCGCCGCCGTTGCCAGCTGCAGCACCAGGGCAGACGCAGG TCGTGCGCAAAGGCTTGTTCGAATTCAATCCGGCGCGACATCAACCTGGCGACAAGATGCTGCTTGGTCAGCGCATCGCT GGAGGTGGTCTGGATGAGATCGAGCGCGCCGTGCAGCTGTTGGTACGGCAGCCAGCCTGCGCGCACTTCATTTCGCAACG CCTGGCCGAGTATTTCGTCAGCGACACGCCCCCCGCTGCGCTGGTGACGCGCATGGCCAACACCTTCCAACGCAGTGATG GCGATATCGCCCAGGTGATGCAGACCATGCTGGCGTCGCCGGAGTTTGCGCAGGCGCAACCGCGCAAGTTCAAGGACCCG AACCGATTCGTGGTGTCGGCGATGCGAGTGGCGTATGAGGATCAACCGGTGATCAATGCCGCGCCGATGGCCAGTTGGGT GCAGCAACTGGGCGAGCCGTTGTTTGGGCGTATCACGCCCGATGGCTGGTCGCTGCAGTCGCAGGCCTGGACCAGCTCCG GGCAATTGGCGCGCCGGTTCGAGGTGGCGCGCTCAATCGGCGGCGGACCGAAGCAACTGTTTCGTCTGGATGGTGATAAC GACACGCCGATTCCGGCGGTGACGCGCATCGACACGCGGCCTGCGTACCGGTGGCTGGCGCCCTCGCTGTCCGCCGCCAC ACAGCAGGCGCTGGACCAGGCGCGCTCGCCTGCCGAATGGAATGGATTCTTGCTGTCGTCGCCTGATTTCAACTATCGCT GA
Upstream 100 bases:
>100_bases AGTGGCCCGATAAACACCTGGTCAATGTCCACAGGCCTTCCGACAACCGTTTAACCCCGCATGCGTTGGCTTGCCCATAC TGGGTCGGTACGTCGTTGCG
Downstream 100 bases:
>100_bases CGCAATGACACCGATTCGGATCCGCTGATGCAACGTCAACGATTCAACGCTTGCAGATTCAAAACGACCGATCCAACGAT CCAACGAATGCCAAGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MEGRMFERVSQAGCMETRVVRAQQWRGRRALPLLIGSVWVLNCTAAEAPLTSTQTRWLQRATYGVDANSATQLTQLGPKR FGALLLQPSDDAALPAPVRVQLQRFDGLHTTLVDLLTQYEADKVRLQAMPDGDEKVALKKDWQARGGQMLVQARQAQLLR AVYAPDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFVDLVMATLESPAMLEYLDNAKSAKGKVNENY ARELMELHTLGVHGGYSQQDVQQLALILTGAGLVPIKANGAPPLPAAAPGQTQVVRKGLFEFNPARHQPGDKMLLGQRIA GGGLDEIERAVQLLVRQPACAHFISQRLAEYFVSDTPPAALVTRMANTFQRSDGDIAQVMQTMLASPEFAQAQPRKFKDP NRFVVSAMRVAYEDQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFEVARSIGGGPKQLFRLDGDN DTPIPAVTRIDTRPAYRWLAPSLSAATQQALDQARSPAEWNGFLLSSPDFNYR
Sequences:
>Translated_533_residues MEGRMFERVSQAGCMETRVVRAQQWRGRRALPLLIGSVWVLNCTAAEAPLTSTQTRWLQRATYGVDANSATQLTQLGPKR FGALLLQPSDDAALPAPVRVQLQRFDGLHTTLVDLLTQYEADKVRLQAMPDGDEKVALKKDWQARGGQMLVQARQAQLLR AVYAPDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFVDLVMATLESPAMLEYLDNAKSAKGKVNENY ARELMELHTLGVHGGYSQQDVQQLALILTGAGLVPIKANGAPPLPAAAPGQTQVVRKGLFEFNPARHQPGDKMLLGQRIA GGGLDEIERAVQLLVRQPACAHFISQRLAEYFVSDTPPAALVTRMANTFQRSDGDIAQVMQTMLASPEFAQAQPRKFKDP NRFVVSAMRVAYEDQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFEVARSIGGGPKQLFRLDGDN DTPIPAVTRIDTRPAYRWLAPSLSAATQQALDQARSPAEWNGFLLSSPDFNYR >Mature_533_residues MEGRMFERVSQAGCMETRVVRAQQWRGRRALPLLIGSVWVLNCTAAEAPLTSTQTRWLQRATYGVDANSATQLTQLGPKR FGALLLQPSDDAALPAPVRVQLQRFDGLHTTLVDLLTQYEADKVRLQAMPDGDEKVALKKDWQARGGQMLVQARQAQLLR AVYAPDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFVDLVMATLESPAMLEYLDNAKSAKGKVNENY ARELMELHTLGVHGGYSQQDVQQLALILTGAGLVPIKANGAPPLPAAAPGQTQVVRKGLFEFNPARHQPGDKMLLGQRIA GGGLDEIERAVQLLVRQPACAHFISQRLAEYFVSDTPPAALVTRMANTFQRSDGDIAQVMQTMLASPEFAQAQPRKFKDP NRFVVSAMRVAYEDQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFEVARSIGGGPKQLFRLDGDN DTPIPAVTRIDTRPAYRWLAPSLSAATQQALDQARSPAEWNGFLLSSPDFNYR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59076; Mature: 59076
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGRMFERVSQAGCMETRVVRAQQWRGRRALPLLIGSVWVLNCTAAEAPLTSTQTRWLQR CCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHH ATYGVDANSATQLTQLGPKRFGALLLQPSDDAALPAPVRVQLQRFDGLHTTLVDLLTQYE HHCCCCCCCHHHHHHCCHHHHCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCC ADKVRLQAMPDGDEKVALKKDWQARGGQMLVQARQAQLLRAVYAPDQLREQLVWFWLNHF CCCEEEEECCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH SVYADKARVKWMAADYMENAIRPNATGKFVDLVMATLESPAMLEYLDNAKSAKGKVNENY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH ARELMELHTLGVHGGYSQQDVQQLALILTGAGLVPIKANGAPPLPAAAPGQTQVVRKGLF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH EFNPARHQPGDKMLLGQRIAGGGLDEIERAVQLLVRQPACAHFISQRLAEYFVSDTPPAA HCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHH LVTRMANTFQRSDGDIAQVMQTMLASPEFAQAQPRKFKDPNRFVVSAMRVAYEDQPVINA HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH APMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFEVARSIGGGPKQLFRLDGDN HHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHEEEECCCC DTPIPAVTRIDTRPAYRWLAPSLSAATQQALDQARSPAEWNGFLLSSPDFNYR CCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MEGRMFERVSQAGCMETRVVRAQQWRGRRALPLLIGSVWVLNCTAAEAPLTSTQTRWLQR CCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHH ATYGVDANSATQLTQLGPKRFGALLLQPSDDAALPAPVRVQLQRFDGLHTTLVDLLTQYE HHCCCCCCCHHHHHHCCHHHHCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCC ADKVRLQAMPDGDEKVALKKDWQARGGQMLVQARQAQLLRAVYAPDQLREQLVWFWLNHF CCCEEEEECCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH SVYADKARVKWMAADYMENAIRPNATGKFVDLVMATLESPAMLEYLDNAKSAKGKVNENY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH ARELMELHTLGVHGGYSQQDVQQLALILTGAGLVPIKANGAPPLPAAAPGQTQVVRKGLF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH EFNPARHQPGDKMLLGQRIAGGGLDEIERAVQLLVRQPACAHFISQRLAEYFVSDTPPAA HCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHH LVTRMANTFQRSDGDIAQVMQTMLASPEFAQAQPRKFKDPNRFVVSAMRVAYEDQPVINA HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH APMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFEVARSIGGGPKQLFRLDGDN HHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHEEEECCCC DTPIPAVTRIDTRPAYRWLAPSLSAATQQALDQARSPAEWNGFLLSSPDFNYR CCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA