Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622045
Identifier: 84622045
GI number: 84622045
Start: 421256
End: 422440
Strand: Direct
Name: 84622045
Synonym: XOO_0388
Alternate gene names: NA
Gene position: 421256-422440 (Clockwise)
Preceding gene: 84622044
Following gene: 84622047
Centisome position: 8.53
GC content: 63.8
Gene sequence:
>1185_bases ATGCAACGACGTCAATTTCTGCTTGCCTCTGCAGCCGCAGCAAGCATGCCGTGGGCCGGTCGTTTGTTCGCTGCGCCACG CGATAGCGCGCGCATGCTGGTGGTGTTTCTGCGGGGTGGCTACGACAGCAATAATCTGCTGGTGCCGCATGACAGCGATT TTTATTACCACTCGCGGCCGAGCCTGGCGATTGCACGACCGGATCCAGCCAATCCAAACAGTGCTGTCGCACTGAATGCG CAGTGGGGCCTGAACCCGGTGATGCGCGATGCTTTGCTGCCGTTTTGGGAACGCAAGCAACTGGCCTTCGTGCCGTTCGC TGGCACCGACGATCTGTCGCGCAGTCATTTCGAAACCCAGGACGATATCGAATCCGGCCAGGCGGGCAAGCACCGCGATT ACCGTTCCGGATTCATGGCGCGCCTGTCGGGCGTGTTGAGTGGAGTGTCGGCGATCGCGTTCACTGATTCGCTGCCTCTG ACCTTTCAAGGCGGCAGCGATTTACCCAATGTGTCGTTGCGGAGCATCGGCAAAGATGGACTGGACGCGCGGCAGGCGCA GATCCTGTCGCAGATGTACGACAGCACGCCGCTGGCTGCCGCCGCGCGCGACGGCTTGGCGCTGCGTCAGCAGGTCACCG TGCAGTTGCGCGACGAGATGGAGCAGGCCGCCCGTGGCGCCGCCAGCGCCCGTACCTTTGCCGATGAAACCCGGCGCATG GCGACCTGGATGCGCGAGCGCTATCGCCTGGGATTCGTCGATGTCGGTGGCTGGGACACGCATGCCAATCAAGGCAGCGT GGCAGGTGGCCTGGCAAATAACCTGCGCAATCTCGGCGAAGGGCTGGCCGCGTATGCCGATGCGCTGGGGCCGGCGTGGA ACGACACCGTGGTGGTGGTGATCTCCGAGTTCGGCCGCACCTTTCGCGAGAACGGCAGCAAGGGCACCGATCACGGCCAT GGCACCACGTACTGGGTGCTGGGCGGAGGTGTGCACGGCGGCCGCATCGCTGGCGAGCAGGTGGCGGTCGAACAGGCGCA GCTGCTGCAGAACCGCGATTACCCGGTGCTCAACAATTACCGCAGCCTGTTCGGCGGGGTGCTGACTCGCATGTGGGGCC TGTCGCCAGCGCAAGTGGAACGGGTTTTTCCGGGCGCCACACCACGCGATCTTGGATTGGTCTGA
Upstream 100 bases:
>100_bases ATCCGCTGATGCAACGTCAACGATTCAACGCTTGCAGATTCAAAACGACCGATCCAACGATCCAACGAATGCCAAGCGGC CATCGCCGCGGGAGTACGCC
Downstream 100 bases:
>100_bases AGTTGGAGAGCGACTAAGCGCAAGAAAGAACATGTGCGGGGGATGACGGCGGATTCGCTTCAATGCATCGTCAGTGCTTC AAGCGGCGGCTGCGCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHDSDFYYHSRPSLAIARPDPANPNSAVALNA QWGLNPVMRDALLPFWERKQLAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVSAIAFTDSLPL TFQGGSDLPNVSLRSIGKDGLDARQAQILSQMYDSTPLAAAARDGLALRQQVTVQLRDEMEQAARGAASARTFADETRRM ATWMRERYRLGFVDVGGWDTHANQGSVAGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKGTDHGH GTTYWVLGGGVHGGRIAGEQVAVEQAQLLQNRDYPVLNNYRSLFGGVLTRMWGLSPAQVERVFPGATPRDLGLV
Sequences:
>Translated_394_residues MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHDSDFYYHSRPSLAIARPDPANPNSAVALNA QWGLNPVMRDALLPFWERKQLAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVSAIAFTDSLPL TFQGGSDLPNVSLRSIGKDGLDARQAQILSQMYDSTPLAAAARDGLALRQQVTVQLRDEMEQAARGAASARTFADETRRM ATWMRERYRLGFVDVGGWDTHANQGSVAGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKGTDHGH GTTYWVLGGGVHGGRIAGEQVAVEQAQLLQNRDYPVLNNYRSLFGGVLTRMWGLSPAQVERVFPGATPRDLGLV >Mature_394_residues MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHDSDFYYHSRPSLAIARPDPANPNSAVALNA QWGLNPVMRDALLPFWERKQLAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVSAIAFTDSLPL TFQGGSDLPNVSLRSIGKDGLDARQAQILSQMYDSTPLAAAARDGLALRQQVTVQLRDEMEQAARGAASARTFADETRRM ATWMRERYRLGFVDVGGWDTHANQGSVAGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKGTDHGH GTTYWVLGGGVHGGRIAGEQVAVEQAQLLQNRDYPVLNNYRSLFGGVLTRMWGLSPAQVERVFPGATPRDLGLV
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42838; Mature: 42838
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHDSDFYYHSRP CCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCCEEECCC SLAIARPDPANPNSAVALNAQWGLNPVMRDALLPFWERKQLAFVPFAGTDDLSRSHFETQ CEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHCCCCH DDIESGQAGKHRDYRSGFMARLSGVLSGVSAIAFTDSLPLTFQGGSDLPNVSLRSIGKDG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHCCCCC LDARQAQILSQMYDSTPLAAAARDGLALRQQVTVQLRDEMEQAARGAASARTFADETRRM CHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ATWMRERYRLGFVDVGGWDTHANQGSVAGGLANNLRNLGEGLAAYADALGPAWNDTVVVV HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE ISEFGRTFRENGSKGTDHGHGTTYWVLGGGVHGGRIAGEQVAVEQAQLLQNRDYPVLNNY EHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH RSLFGGVLTRMWGLSPAQVERVFPGATPRDLGLV HHHHHHHHHHHHCCCHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHDSDFYYHSRP CCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCCEEECCC SLAIARPDPANPNSAVALNAQWGLNPVMRDALLPFWERKQLAFVPFAGTDDLSRSHFETQ CEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHCCCCH DDIESGQAGKHRDYRSGFMARLSGVLSGVSAIAFTDSLPLTFQGGSDLPNVSLRSIGKDG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHCCCCC LDARQAQILSQMYDSTPLAAAARDGLALRQQVTVQLRDEMEQAARGAASARTFADETRRM CHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ATWMRERYRLGFVDVGGWDTHANQGSVAGGLANNLRNLGEGLAAYADALGPAWNDTVVVV HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE ISEFGRTFRENGSKGTDHGHGTTYWVLGGGVHGGRIAGEQVAVEQAQLLQNRDYPVLNNY EHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH RSLFGGVLTRMWGLSPAQVERVFPGATPRDLGLV HHHHHHHHHHHHCCCHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA