Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489488
Identifier: 84489488
GI number: 84489488
Start: 793151
End: 794008
Strand: Direct
Name: 84489488
Synonym: Msp_0679
Alternate gene names: NA
Gene position: 793151-794008 (Clockwise)
Preceding gene: 84489487
Following gene: 84489489
Centisome position: 44.88
GC content: 32.28
Gene sequence:
>858_bases ATGGTCAATGAAAAAAACTCTGATAATTATCAAGAGTTGACTGAAGCCCGAAAGGATTATAAATTACATCTGACTATTTT AGTATGTATAGTGATAGCTGAATATATTGGCATGCTAACAGTAAATCTCTATGGAATTACAATAGTATTCATGCCATTAT TATATTCATTGGTTTTAGCAATTGCACTCTATTTAGCAAAACCTGTTAAATGGATTACAGATAAACAATCAAATAAAGCT AGTACAATTATGATGCTCTTAATTGGTCCATTACTAGCTAAACTAGCAATTGCAAGTGGACAAAATATTCAGATTATTTT TAATGCTGGACCTGCAATTCTTTTACAAGAGATAGGAAACTTGGGAACAATATTTGCAGCATTACCTGTAGCATTGTTAC TTGGTTTTAAACGTGAATCTATTGGAATGACAAGTTCTATATGTAGAGAGCCACAGATGGCTGTTGTTATAGATACCTTT GGATTTAATTCACCAGAAACAAAAGGATTTTTCACAGTATTTCTTATAGGTACTGTTTTAGGAACACCATTTATTAGTTT ACTAGCAAGTGTATTGGCACATGTTATTCCATTACACCCATATGCTTATGGAATGGCATGTGGTATTGGTAGTGCAAGTA TGAATGCAGCAGCAGTAGCATCGTTGTGTGCTATTTTCCCTTCAGCAACAGTTCAACTAGAAGCATTTAGTGGAATGGCA AATCTGCTTTCAATGGTTACAGGTATGTATGTTTATATATTAGTAGCTATTCCATTAACAGAATGGTTATATCGTAAACT TGAACCAGTGATTAGTCGAATTTTATTTAAAAAAGAAAATAAAAAAATAAAGGATTGA
Upstream 100 bases:
>100_bases ATAATTAATTTCAACTTTAAAAAACCATTAATTATATATGATTTATTATAATAATGTAGGGGATTTAAAAAAAATATATA TAATTTTTGGGGGATGTATT
Downstream 100 bases:
>100_bases TTTAAAAGTGTCAAAGATTTTATCTAAAGAAGTGGTGATGGAATGGATACTTATTTTAATTATCTTTTCTTTCATGTCTG CTATAGGTAACTATATAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLAIALYLAKPVKWITDKQSNKA STIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGNLGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTF GFNSPETKGFFTVFLIGTVLGTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD
Sequences:
>Translated_285_residues MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLAIALYLAKPVKWITDKQSNKA STIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGNLGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTF GFNSPETKGFFTVFLIGTVLGTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD >Mature_285_residues MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLAIALYLAKPVKWITDKQSNKA STIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGNLGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTF GFNSPETKGFFTVFLIGTVLGTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31047; Mature: 31047
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALYLAKPVKWITDKQSNKASTIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCC LGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTFGFNSPETKGFFTVFLIGTVL HHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH GTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHH NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVNEKNSDNYQELTEARKDYKLHLTILVCIVIAEYIGMLTVNLYGITIVFMPLLYSLVLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALYLAKPVKWITDKQSNKASTIMMLLIGPLLAKLAIASGQNIQIIFNAGPAILLQEIGN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCC LGTIFAALPVALLLGFKRESIGMTSSICREPQMAVVIDTFGFNSPETKGFFTVFLIGTVL HHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH GTPFISLLASVLAHVIPLHPYAYGMACGIGSASMNAAAVASLCAIFPSATVQLEAFSGMA HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHH NLLSMVTGMYVYILVAIPLTEWLYRKLEPVISRILFKKENKKIKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA