Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489489
Identifier: 84489489
GI number: 84489489
Start: 794016
End: 794483
Strand: Direct
Name: 84489489
Synonym: Msp_0680
Alternate gene names: NA
Gene position: 794016-794483 (Clockwise)
Preceding gene: 84489488
Following gene: 84489490
Centisome position: 44.93
GC content: 28.21
Gene sequence:
>468_bases GTGTCAAAGATTTTATCTAAAGAAGTGGTGATGGAATGGATACTTATTTTAATTATCTTTTCTTTCATGTCTGCTATAGG TAACTATATAGGTTATCATTATCCATTTCAAGAATCCTTATATGGTATGTTTATTTTATGTGCTATAACCTTACTAGGAC TAATAATAGAACATCATATTTCATATAACATACCTGCTATTATTTACATAAGTATTATAGGTTTAATAGTGGCACTTCCA TGGTCACCAATATCAAGTACTATTATATACTATACATCAAAGGTAAATATTGTATCATTAACAACAATACTTCTAGCATA TGCTGGAATAGCTATGGGAAAAGACTTAGGAGAATTTAAAAAAGTAGGTCTAAAGGGTATTATTGTTACCTTTTTTGTAA TATTAGGAACATATATGGGTTCTGCATTAATTGCACAAGGAGTTTTAATGTATACTGGAATGATTTAA
Upstream 100 bases:
>100_bases GCTATTCCATTAACAGAATGGTTATATCGTAAACTTGAACCAGTGATTAGTCGAATTTTATTTAAAAAAGAAAATAAAAA AATAAAGGATTGATTTAAAA
Downstream 100 bases:
>100_bases ACTCCTTTCTAAAAAACTTTTTTTTTAAAATATTTATATAAAATTATAGTTACTAGTAAAAATATTAAAGTATTATTCTA TAAACTATTATTATACTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSKILSKEVVMEWILILIIFSFMSAIGNYIGYHYPFQESLYGMFILCAITLLGLIIEHHISYNIPAIIYISIIGLIVALP WSPISSTIIYYTSKVNIVSLTTILLAYAGIAMGKDLGEFKKVGLKGIIVTFFVILGTYMGSALIAQGVLMYTGMI
Sequences:
>Translated_155_residues MSKILSKEVVMEWILILIIFSFMSAIGNYIGYHYPFQESLYGMFILCAITLLGLIIEHHISYNIPAIIYISIIGLIVALP WSPISSTIIYYTSKVNIVSLTTILLAYAGIAMGKDLGEFKKVGLKGIIVTFFVILGTYMGSALIAQGVLMYTGMI >Mature_154_residues SKILSKEVVMEWILILIIFSFMSAIGNYIGYHYPFQESLYGMFILCAITLLGLIIEHHISYNIPAIIYISIIGLIVALPW SPISSTIIYYTSKVNIVSLTTILLAYAGIAMGKDLGEFKKVGLKGIIVTFFVILGTYMGSALIAQGVLMYTGMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17128; Mature: 16997
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILSKEVVMEWILILIIFSFMSAIGNYIGYHYPFQESLYGMFILCAITLLGLIIEHHI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SYNIPAIIYISIIGLIVALPWSPISSTIIYYTSKVNIVSLTTILLAYAGIAMGKDLGEFK CCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHH KVGLKGIIVTFFVILGTYMGSALIAQGVLMYTGMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKILSKEVVMEWILILIIFSFMSAIGNYIGYHYPFQESLYGMFILCAITLLGLIIEHHI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SYNIPAIIYISIIGLIVALPWSPISSTIIYYTSKVNIVSLTTILLAYAGIAMGKDLGEFK CCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHH KVGLKGIIVTFFVILGTYMGSALIAQGVLMYTGMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA