Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489319
Identifier: 84489319
GI number: 84489319
Start: 602930
End: 603457
Strand: Direct
Name: 84489319
Synonym: Msp_0509
Alternate gene names: NA
Gene position: 602930-603457 (Clockwise)
Preceding gene: 84489317
Following gene: 84489324
Centisome position: 34.11
GC content: 23.3
Gene sequence:
>528_bases TTGAATAGAATGTCAAGTGAAGCTAATAAAAAGTTTGTATCTAATATTAAAAAGGAAATACAACAAAAAATTAAGACAGA GAATAAAAATATTAAAGCACTCAATGATGAAAACATGGAATTAACACGATCTATTGAGGGTTATTCTAATTTTTATCATG AAGTAGAACATTTTTTCACTGAAAGTATGGCTGATTTTAATGTTAAACAGGATGAACTTCCAGACTATTTTAAAAGTAAT ATTAATGAGGTGTACCAGAATTATTCACAGATTAGATTAGATGCTATTGATGAAAAAAATCACTTAAATGAATATATTCT ACATTGTAAAAAAGAAATACAAACTAATCAAAGATCTTTAAAATTCTATAAGTCTCAATACTCTGATAGTGATATATTTA GTGAATGTCTTCCACTTGTTGATGTATATGAAAAGAAAATAGAATTATATGAAAAAAATATTCAAAAAACTAATGATATA ATATCTACTTTAGATGAAATAATTAATATTCTTAGTAATTGGAAATAA
Upstream 100 bases:
>100_bases TTAATTAATTTTAACAAGACTTTTTTTTAATAAACTTTTTTAATTATTTAATTCAATAAATATAATTAGAAAACATTTAA TATTTTTTTAGTTAAGTGGG
Downstream 100 bases:
>100_bases AAAAAAGAGTTTTAATAAAACTCTTATACCACTACTTTTTCAAGTCTTTTCATGGCTTTTTCTAAGTTTTTATAACTTTG TGCATAGGATAATCTCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFTESMADFNVKQDELPDYFKSN INEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSLKFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDI ISTLDEIINILSNWK
Sequences:
>Translated_175_residues MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFTESMADFNVKQDELPDYFKSN INEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSLKFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDI ISTLDEIINILSNWK >Mature_175_residues MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFTESMADFNVKQDELPDYFKSN INEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSLKFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDI ISTLDEIINILSNWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20960; Mature: 20960
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ESMADFNVKQDELPDYFKSNINEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSL HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDIISTLDEIINILSNWK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRMSSEANKKFVSNIKKEIQQKIKTENKNIKALNDENMELTRSIEGYSNFYHEVEHFFT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ESMADFNVKQDELPDYFKSNINEVYQNYSQIRLDAIDEKNHLNEYILHCKKEIQTNQRSL HHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KFYKSQYSDSDIFSECLPLVDVYEKKIELYEKNIQKTNDIISTLDEIINILSNWK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA