Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489317

Identifier: 84489317

GI number: 84489317

Start: 599627

End: 600037

Strand: Direct

Name: 84489317

Synonym: Msp_0506

Alternate gene names: NA

Gene position: 599627-600037 (Clockwise)

Preceding gene: 84489315

Following gene: 84489319

Centisome position: 33.93

GC content: 29.44

Gene sequence:

>411_bases
ATGAGAGAAAAGAATATTTTAATTATAGTTATAGGAATTATAGTTGTATGTAGTTTAGTAGTAGGTGTGGGCATGTTATT
AACTAATAATACAACACAAGAGAATAATACCACAGTAAATAATACTACTTCTAATATAACAATGAATAATACTACTAGTA
ATCAAACACCAAACACGACAGATACCAAAGTAACATCACAACAAGATAATACTCAAAAACAACAAACTACCTCTAAAAAG
TCCACATCAAATAAAGACAGCACGCCTACAAAAGGAACATATAAAGGAGTAGAATATGAATTACCTGATAAATATCCATA
CTACAGTCCACAGGCAGGAAAAACATATCATAATAAAAAAGAAGCATATAAAGATATGAAAGATGCAATAGATGGCGGAA
TTGCAGATTAA

Upstream 100 bases:

>100_bases
CTTATTTTAATACAATAAAATTAAATAATACTACTTAATAAACTATAAATTATAATATAAAGTTATTAAAACTTTTATAA
AAAATAGTAAGGAGAAAATT

Downstream 100 bases:

>100_bases
ATGTATATGATGGATTAATATTCCATCTTATTAAGTATTTTTTACTACTTAAAATATTAAGTCTCAATAATCAACATATT
TAAGTTTATATTAATAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MREKNILIIVIGIIVVCSLVVGVGMLLTNNTTQENNTTVNNTTSNITMNNTTSNQTPNTTDTKVTSQQDNTQKQQTTSKK
STSNKDSTPTKGTYKGVEYELPDKYPYYSPQAGKTYHNKKEAYKDMKDAIDGGIAD

Sequences:

>Translated_136_residues
MREKNILIIVIGIIVVCSLVVGVGMLLTNNTTQENNTTVNNTTSNITMNNTTSNQTPNTTDTKVTSQQDNTQKQQTTSKK
STSNKDSTPTKGTYKGVEYELPDKYPYYSPQAGKTYHNKKEAYKDMKDAIDGGIAD
>Mature_136_residues
MREKNILIIVIGIIVVCSLVVGVGMLLTNNTTQENNTTVNNTTSNITMNNTTSNQTPNTTDTKVTSQQDNTQKQQTTSKK
STSNKDSTPTKGTYKGVEYELPDKYPYYSPQAGKTYHNKKEAYKDMKDAIDGGIAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14991; Mature: 14991

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKNILIIVIGIIVVCSLVVGVGMLLTNNTTQENNTTVNNTTSNITMNNTTSNQTPNTT
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
DTKVTSQQDNTQKQQTTSKKSTSNKDSTPTKGTYKGVEYELPDKYPYYSPQAGKTYHNKK
CCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHH
EAYKDMKDAIDGGIAD
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MREKNILIIVIGIIVVCSLVVGVGMLLTNNTTQENNTTVNNTTSNITMNNTTSNQTPNTT
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
DTKVTSQQDNTQKQQTTSKKSTSNKDSTPTKGTYKGVEYELPDKYPYYSPQAGKTYHNKK
CCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHH
EAYKDMKDAIDGGIAD
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA