Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is coaD [H]
Identifier: 84489324
GI number: 84489324
Start: 608523
End: 608981
Strand: Direct
Name: coaD [H]
Synonym: Msp_0514
Alternate gene names: 84489324
Gene position: 608523-608981 (Clockwise)
Preceding gene: 84489319
Following gene: 84489325
Centisome position: 34.43
GC content: 29.85
Gene sequence:
>459_bases ATGAAGGCGAAATATAGAAAAATAGCTGTGGGAGGAACGTTCGATAAACTACATAAGGGACATGAAGCCCTACTAGATGC AGCTTTTACAATGGCAGATGAAGTTTTAATTGGTATAACTTCAGATGATTTTGCATCAATGAAAAATCACGTAATTGAAC CATGTGAAGTCAGAATAACTAAATTAAAATCAATAATAAAACCATACAACAAAAAATATATAATTAAAAAAATCATGGAT TCAAATGGAACTGCAGATACTGATAAAAATCTTGATGCAATAGTAGTAAGTAAGGAAACAGAAAAATCAGCCATTGAAAT AAACAAGATACGATGTGAAAATGGTTTAAATCCATTGGATATTATAATAATTGAATGGATATTAGCTGATGATGGTGTTC CAATTTCTTCAACCCGTATAAGAAAAGGGGAAATAGATCAAAAAGGAACTTTATTATAA
Upstream 100 bases:
>100_bases AGTATTTCTATAAATTCCTTTAAATAATATTATTTAGAAATATAAAACTAGTGAATATTTTTAAACTTATTTTAAAGATA AAATAGTAAAGGAATTTTAT
Downstream 100 bases:
>100_bases CTTCTTTTTAGATATTAGATAGTATGGAATTTCTACTGGTGTTTAAGATTATCTGTGTGTGATTGTTTATTTCATTTAGA TAATTAATTGTAAAATGGGC
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKAKYRKIAVGGTFDKLHKGHEALLDAAFTMADEVLIGITSDDFASMKNHVIEPCEVRITKLKSIIKPYNKKYIIKKIMD SNGTADTDKNLDAIVVSKETEKSAIEINKIRCENGLNPLDIIIIEWILADDGVPISSTRIRKGEIDQKGTLL
Sequences:
>Translated_152_residues MKAKYRKIAVGGTFDKLHKGHEALLDAAFTMADEVLIGITSDDFASMKNHVIEPCEVRITKLKSIIKPYNKKYIIKKIMD SNGTADTDKNLDAIVVSKETEKSAIEINKIRCENGLNPLDIIIIEWILADDGVPISSTRIRKGEIDQKGTLL >Mature_152_residues MKAKYRKIAVGGTFDKLHKGHEALLDAAFTMADEVLIGITSDDFASMKNHVIEPCEVRITKLKSIIKPYNKKYIIKKIMD SNGTADTDKNLDAIVVSKETEKSAIEINKIRCENGLNPLDIIIIEWILADDGVPISSTRIRKGEIDQKGTLL
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG1019
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eukaryotic CoaD family [H]
Homologues:
Organism=Homo sapiens, GI110227605, Length=151, Percent_Identity=34.4370860927152, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI110227603, Length=151, Percent_Identity=34.4370860927152, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI110227601, Length=151, Percent_Identity=34.4370860927152, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI205277394, Length=151, Percent_Identity=34.4370860927152, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25143409, Length=147, Percent_Identity=37.4149659863946, Blast_Score=86, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6321716, Length=148, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=3e-13, Organism=Drosophila melanogaster, GI24658602, Length=153, Percent_Identity=30.0653594771242, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 16927; Mature: 16927
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKYRKIAVGGTFDKLHKGHEALLDAAFTMADEVLIGITSDDFASMKNHVIEPCEVRIT CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCHHHHHH KLKSIIKPYNKKYIIKKIMDSNGTADTDKNLDAIVVSKETEKSAIEINKIRCENGLNPLD HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHH IIIIEWILADDGVPISSTRIRKGEIDQKGTLL HHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAKYRKIAVGGTFDKLHKGHEALLDAAFTMADEVLIGITSDDFASMKNHVIEPCEVRIT CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCHHHHHH KLKSIIKPYNKKYIIKKIMDSNGTADTDKNLDAIVVSKETEKSAIEINKIRCENGLNPLD HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHH IIIIEWILADDGVPISSTRIRKGEIDQKGTLL HHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]