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The map label for this gene is mtrC

Identifier: 84489123

GI number: 84489123

Start: 362687

End: 363475

Strand: Direct

Name: mtrC

Synonym: Msp_0302

Alternate gene names: 84489123

Gene position: 362687-363475 (Clockwise)

Preceding gene: 84489122

Following gene: 84489124

Centisome position: 20.52

GC content: 26.11

Gene sequence:

>789_bases
ATGGCTGATGATTTAATACCTTCTCAGATAATAATTTTAAGTTCTATTGTTGGCGGATTAATTTGTATAGCACTAAGTAG
TATACCTGTGGTTGGTGGTATTTTTTCAATTATTGCAACAATATTAGGTGTTATTTGTGGAACAAATACACTTAGACACA
TAGGAAAATATAGTTTAGGTACTGGAGTTCCATCAATAGTTTATATGTTAACAGCAGCAGGACTTGTTAGTATGATATGT
GGTGTAATGATATCAAGAATAATTAATCAAAATTTATTATATCCAATATTTAGTATGATAATAGCAATGATAATTGCTTT
TGTAATTTCACTCATGTGTACACATATCTTCAAAATACAAGTTGAAATATTAAGAAAATCATTCATAACATTAACAATTG
CAACAGTAATATCAATTATTGGAATGTCTACATTGATAGTTTCATCCTCTGATATTATGTTAATCTATTCAAATGTAATT
AAAAATGGACTTATAATTATATTAATGATATTATCAGTCATGGCAATACAAAATCCATATAATTCTTGTATGGGACCAAA
TGAAGATCAGTATAGAACATTATCATTATCCTTATCCAATGCATTTTTAATGCTTATAATAATTTCAATTATTAGTATTT
TAAATAGTTCATACTGGTATATTTACATTATAATATCAATTATTGGATGGTTAGTTTCATTTAAATTATATATTAAATAT
ACAAAACAGCAAGCTGCACTAATAAAATGGTCTGGACTATGGCCTAATAATGATGAAGGGGGAATATAA

Upstream 100 bases:

>100_bases
TAAGAAATTTAGGAAAAAAATAGTTTCAGGTACATTTTCATGTTTTTTAATATCAATATTCTTGGCTATTATTTATATGA
TAATATTGGGTGGAATTTAA

Downstream 100 bases:

>100_bases
TTGGTAGATACAACAGCAGTTATAATTGATGATGATTTAGTTTTAGATGTTAATAATGGTATAATAGGAACAAAAGATAA
TAATCAAAAACAACATCTTC

Product: tetrahydromethanopterin S-methyltransferase subunit C

Products: NA

Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MADDLIPSQIIILSSIVGGLICIALSSIPVVGGIFSIIATILGVICGTNTLRHIGKYSLGTGVPSIVYMLTAAGLVSMIC
GVMISRIINQNLLYPIFSMIIAMIIAFVISLMCTHIFKIQVEILRKSFITLTIATVISIIGMSTLIVSSSDIMLIYSNVI
KNGLIIILMILSVMAIQNPYNSCMGPNEDQYRTLSLSLSNAFLMLIIISIISILNSSYWYIYIIISIIGWLVSFKLYIKY
TKQQAALIKWSGLWPNNDEGGI

Sequences:

>Translated_262_residues
MADDLIPSQIIILSSIVGGLICIALSSIPVVGGIFSIIATILGVICGTNTLRHIGKYSLGTGVPSIVYMLTAAGLVSMIC
GVMISRIINQNLLYPIFSMIIAMIIAFVISLMCTHIFKIQVEILRKSFITLTIATVISIIGMSTLIVSSSDIMLIYSNVI
KNGLIIILMILSVMAIQNPYNSCMGPNEDQYRTLSLSLSNAFLMLIIISIISILNSSYWYIYIIISIIGWLVSFKLYIKY
TKQQAALIKWSGLWPNNDEGGI
>Mature_261_residues
ADDLIPSQIIILSSIVGGLICIALSSIPVVGGIFSIIATILGVICGTNTLRHIGKYSLGTGVPSIVYMLTAAGLVSMICG
VMISRIINQNLLYPIFSMIIAMIIAFVISLMCTHIFKIQVEILRKSFITLTIATVISIIGMSTLIVSSSDIMLIYSNVIK
NGLIIILMILSVMAIQNPYNSCMGPNEDQYRTLSLSLSNAFLMLIIISIISILNSSYWYIYIIISIIGWLVSFKLYIKYT
KQQAALIKWSGLWPNNDEGGI

Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step [H]

COG id: COG4061

COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit C

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mtrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005865
- ProDom:   PD013899 [H]

Pfam domain/function: PF04211 MtrC [H]

EC number: =2.1.1.86 [H]

Molecular weight: Translated: 28654; Mature: 28523

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDLIPSQIIILSSIVGGLICIALSSIPVVGGIFSIIATILGVICGTNTLRHIGKYSLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHCC
TGVPSIVYMLTAAGLVSMICGVMISRIINQNLLYPIFSMIIAMIIAFVISLMCTHIFKIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEILRKSFITLTIATVISIIGMSTLIVSSSDIMLIYSNVIKNGLIIILMILSVMAIQNPY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
NSCMGPNEDQYRTLSLSLSNAFLMLIIISIISILNSSYWYIYIIISIIGWLVSFKLYIKY
HHCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TKQQAALIKWSGLWPNNDEGGI
HHHHHHHEEECCCCCCCCCCCC
>Mature Secondary Structure 
ADDLIPSQIIILSSIVGGLICIALSSIPVVGGIFSIIATILGVICGTNTLRHIGKYSLG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHCC
TGVPSIVYMLTAAGLVSMICGVMISRIINQNLLYPIFSMIIAMIIAFVISLMCTHIFKIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEILRKSFITLTIATVISIIGMSTLIVSSSDIMLIYSNVIKNGLIIILMILSVMAIQNPY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
NSCMGPNEDQYRTLSLSLSNAFLMLIIISIISILNSSYWYIYIIISIIGWLVSFKLYIKY
HHCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TKQQAALIKWSGLWPNNDEGGI
HHHHHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]