Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

Click here to switch to the map view.

The map label for this gene is mtrB

Identifier: 84489124

GI number: 84489124

Start: 363476

End: 363769

Strand: Direct

Name: mtrB

Synonym: Msp_0303

Alternate gene names: NA

Gene position: 363476-363769 (Clockwise)

Preceding gene: 84489123

Following gene: 84489125

Centisome position: 20.57

GC content: 27.55

Gene sequence:

>294_bases
TTGGTAGATACAACAGCAGTTATAATTGATGATGATTTAGTTTTAGATGTTAATAATGGTATAATAGGAACAAAAGATAA
TAATCAAAAACAACATCTTCCATTTGATGATCTGGTAGAAAAAATAGATACTCTGGAAGTGGCAATTAATAATCTAGAAT
CATCATTAGATCCTAGAACAACATCTAATCTATCACAACCTGGAAGAGAAGGAATATATGAAAAAGCAGGATTAATTACA
AACATTGTAATTGGTGTGATTATAGCATTAGTTTTCATACTTTTATTAGTATAA

Upstream 100 bases:

>100_bases
GTTAGTTTCATTTAAATTATATATTAAATATACAAAACAGCAAGCTGCACTAATAAAATGGTCTGGACTATGGCCTAATA
ATGATGAAGGGGGAATATAA

Downstream 100 bases:

>100_bases
AATAAGGGGAGATTATATGGCAGATAAAAAAGAAGTTATTCAAAATTGGCCCTTAGAAACTGGAGATTATGCAGTGGGAA
ATGTTGAAAGTCCAGTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MVDTTAVIIDDDLVLDVNNGIIGTKDNNQKQHLPFDDLVEKIDTLEVAINNLESSLDPRTTSNLSQPGREGIYEKAGLIT
NIVIGVIIALVFILLLV

Sequences:

>Translated_97_residues
MVDTTAVIIDDDLVLDVNNGIIGTKDNNQKQHLPFDDLVEKIDTLEVAINNLESSLDPRTTSNLSQPGREGIYEKAGLIT
NIVIGVIIALVFILLLV
>Mature_97_residues
MVDTTAVIIDDDLVLDVNNGIIGTKDNNQKQHLPFDDLVEKIDTLEVAINNLESSLDPRTTSNLSQPGREGIYEKAGLIT
NIVIGVIIALVFILLLV

Specific function: Unknown

COG id: COG4062

COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10570; Mature: 10570

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTTAVIIDDDLVLDVNNGIIGTKDNNQKQHLPFDDLVEKIDTLEVAINNLESSLDPRT
CCCCEEEEECCCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
TSNLSQPGREGIYEKAGLITNIVIGVIIALVFILLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVDTTAVIIDDDLVLDVNNGIIGTKDNNQKQHLPFDDLVEKIDTLEVAINNLESSLDPRT
CCCCEEEEECCCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
TSNLSQPGREGIYEKAGLITNIVIGVIIALVFILLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA