Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489002
Identifier: 84489002
GI number: 84489002
Start: 216085
End: 217587
Strand: Direct
Name: 84489002
Synonym: Msp_0174
Alternate gene names: NA
Gene position: 216085-217587 (Clockwise)
Preceding gene: 84489001
Following gene: 84489006
Centisome position: 12.23
GC content: 30.74
Gene sequence:
>1503_bases ATGACAAAGATAGGAATTTTAGAAGTTGAAGGTGTTTTAACATTATATGAACACTTTGGTTATTTACCTACAGATGTAGT TAAATCTAATGGTAGATTGGAAAATGGAAAAAAAGCTCATGAAGAATTAGATGGTATAATAATACCTGGAGGTACAATTC TTGAATCAGAATCTATGACTGGTGAGGTTGAAGAAGAAATTAATCTTATAAATGATGATGATGGGTTTATTTTAGGTATG TGTGCAGGATTTCAGGTACTTGGAAAACATACAAATGTTGGAAGAAACTCTCCAGTACCAATAATAAGAAAGGGTATGGG TCTTTTAGATGTTACTTTTGAACCATTTATAAATACAAATAAGGTAAATGCAGATATTGTTGATGATAACACACTCTTTA CAAAAAACTTAAAGGACACAACAGTAAGTGGTTTTCATTGTCATACATATGGTAGGATAGAATCAAATGATAAGAATGTT ATCTACTCTAATATTCAAAGATCAAACTATAAATATAAACCAGAAAGGGTATTATCTGGTGTTTCAAATAAAAAGGGAAA TATATTAGGAACAACAGTGCACTGTTTACTTGATAATAATCCTCAAATAGTAAACAACATACTAGAATATCTTGATGCTA CAAATGAATATGAAGACATTAAACAAAGAAATAAAAAACTTCAAAGTAAGGTATTTTCTGAAATTGGAGTCGATACAAAC AACATGGCACCACTAAGAGAAAAACATCCTGAAGTTCCACCAATGATAATGTTAATGGGAACAGGTTCTGAATCTGGAAA AACATTTCTTGCTAGTGGAATTGTAGGAGCACTAAGAGAAAAGGGAATACATACGTATGTAATTAAAACAGGTCCTGATA TAAGAGATTTATCACCATCTCTTTATGTAAATAAGGAAAAATTGGAGGATTATGCATCGATACAAATAAGTAATATTGGA TGGACTCCACTTGAAAAAATAATAGAACAAGTAAAGAATAAGGGCTATGATTTAGTACTGGTTGAAGGAGTAATGAGTGC AGCAACAGGACTACTTAATAAAAAAACACCATATTCAACTGCAGAAATTGCATATGCAGGTAATATTCCTGTTATAATGG TATCTAGTGTAAGTAAGGGTGGTATTGAAACAGCAGCTATTGATATTGAAGCACATATTAATCTATTAAATAAGATGGAT GTTAAAACAGCTGGTGTTATTTTAAATAAAACCTATGATGAAGGTATTGTGGAACATGTATCTGAATTCTTATCTAATAA ATCTGGAATACCAGAGGATAATATTTGGAGTATTGGTAAGGCCAAAGTAGAGAATAAAGGACAGGTTCCAGAGGATTATC TTCAATTGGAAACATTTACAAAAGCAGCAATGGATGTTGTTAAAGAATATGTGGATGTTACAAAAATAATGGATTTAGCT AAAGTACCAGAATTTAGAGGATACTTATCCTATGAGGAAATTTGTGATTTATATAAAAAATAG
Upstream 100 bases:
>100_bases TATAGATATTATTGAAATTCTATTATAGAATTCTAATAAATTATTTTTATATAGTCAAACAATAGATTTAATTATAGAAT GAAATTTTTAATGTGATTGT
Downstream 100 bases:
>100_bases TTTCATAAAAAAAAGGAGTATGGAGAATTTAATTGTTATTTTTAAATTCTTTGTATGCTTCTATTATTTCATCACCACTA ATAAATACGTGATTATTTTT
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MTKIGILEVEGVLTLYEHFGYLPTDVVKSNGRLENGKKAHEELDGIIIPGGTILESESMTGEVEEEINLINDDDGFILGM CAGFQVLGKHTNVGRNSPVPIIRKGMGLLDVTFEPFINTNKVNADIVDDNTLFTKNLKDTTVSGFHCHTYGRIESNDKNV IYSNIQRSNYKYKPERVLSGVSNKKGNILGTTVHCLLDNNPQIVNNILEYLDATNEYEDIKQRNKKLQSKVFSEIGVDTN NMAPLREKHPEVPPMIMLMGTGSESGKTFLASGIVGALREKGIHTYVIKTGPDIRDLSPSLYVNKEKLEDYASIQISNIG WTPLEKIIEQVKNKGYDLVLVEGVMSAATGLLNKKTPYSTAEIAYAGNIPVIMVSSVSKGGIETAAIDIEAHINLLNKMD VKTAGVILNKTYDEGIVEHVSEFLSNKSGIPEDNIWSIGKAKVENKGQVPEDYLQLETFTKAAMDVVKEYVDVTKIMDLA KVPEFRGYLSYEEICDLYKK
Sequences:
>Translated_500_residues MTKIGILEVEGVLTLYEHFGYLPTDVVKSNGRLENGKKAHEELDGIIIPGGTILESESMTGEVEEEINLINDDDGFILGM CAGFQVLGKHTNVGRNSPVPIIRKGMGLLDVTFEPFINTNKVNADIVDDNTLFTKNLKDTTVSGFHCHTYGRIESNDKNV IYSNIQRSNYKYKPERVLSGVSNKKGNILGTTVHCLLDNNPQIVNNILEYLDATNEYEDIKQRNKKLQSKVFSEIGVDTN NMAPLREKHPEVPPMIMLMGTGSESGKTFLASGIVGALREKGIHTYVIKTGPDIRDLSPSLYVNKEKLEDYASIQISNIG WTPLEKIIEQVKNKGYDLVLVEGVMSAATGLLNKKTPYSTAEIAYAGNIPVIMVSSVSKGGIETAAIDIEAHINLLNKMD VKTAGVILNKTYDEGIVEHVSEFLSNKSGIPEDNIWSIGKAKVENKGQVPEDYLQLETFTKAAMDVVKEYVDVTKIMDLA KVPEFRGYLSYEEICDLYKK >Mature_499_residues TKIGILEVEGVLTLYEHFGYLPTDVVKSNGRLENGKKAHEELDGIIIPGGTILESESMTGEVEEEINLINDDDGFILGMC AGFQVLGKHTNVGRNSPVPIIRKGMGLLDVTFEPFINTNKVNADIVDDNTLFTKNLKDTTVSGFHCHTYGRIESNDKNVI YSNIQRSNYKYKPERVLSGVSNKKGNILGTTVHCLLDNNPQIVNNILEYLDATNEYEDIKQRNKKLQSKVFSEIGVDTNN MAPLREKHPEVPPMIMLMGTGSESGKTFLASGIVGALREKGIHTYVIKTGPDIRDLSPSLYVNKEKLEDYASIQISNIGW TPLEKIIEQVKNKGYDLVLVEGVMSAATGLLNKKTPYSTAEIAYAGNIPVIMVSSVSKGGIETAAIDIEAHINLLNKMDV KTAGVILNKTYDEGIVEHVSEFLSNKSGIPEDNIWSIGKAKVENKGQVPEDYLQLETFTKAAMDVVKEYVDVTKIMDLAK VPEFRGYLSYEEICDLYKK
Specific function: Unknown
COG id: COG1492
COG function: function code H; Cobyric acid synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR017926 - InterPro: IPR011698 [H]
Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]
EC number: NA
Molecular weight: Translated: 55349; Mature: 55218
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIGILEVEGVLTLYEHFGYLPTDVVKSNGRLENGKKAHEELDGIIIPGGTILESESMT CCCEEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHCCCEEECCCCEEECCCCC GEVEEEINLINDDDGFILGMCAGFQVLGKHTNVGRNSPVPIIRKGMGLLDVTFEPFINTN CCCHHHCCEECCCCCEEEEEHHCHHHHCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCC KVNADIVDDNTLFTKNLKDTTVSGFHCHTYGRIESNDKNVIYSNIQRSNYKYKPERVLSG CCEEEEECCCCEEECCCCCCCCCCEEEEEECCEECCCCCEEEECCCCCCCCCCHHHHHCC VSNKKGNILGTTVHCLLDNNPQIVNNILEYLDATNEYEDIKQRNKKLQSKVFSEIGVDTN CCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC NMAPLREKHPEVPPMIMLMGTGSESGKTFLASGIVGALREKGIHTYVIKTGPDIRDLSPS CCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCC LYVNKEKLEDYASIQISNIGWTPLEKIIEQVKNKGYDLVLVEGVMSAATGLLNKKTPYST CEEEHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCC AEIAYAGNIPVIMVSSVSKGGIETAAIDIEAHINLLNKMDVKTAGVILNKTYDEGIVEHV EEEEEECCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCHHHCEEEECCHHHHHHHHH SEFLSNKSGIPEDNIWSIGKAKVENKGQVPEDYLQLETFTKAAMDVVKEYVDVTKIMDLA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVPEFRGYLSYEEICDLYKK HCCHHHCCCCHHHHHHHHCC >Mature Secondary Structure TKIGILEVEGVLTLYEHFGYLPTDVVKSNGRLENGKKAHEELDGIIIPGGTILESESMT CCEEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHCCCEEECCCCEEECCCCC GEVEEEINLINDDDGFILGMCAGFQVLGKHTNVGRNSPVPIIRKGMGLLDVTFEPFINTN CCCHHHCCEECCCCCEEEEEHHCHHHHCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCC KVNADIVDDNTLFTKNLKDTTVSGFHCHTYGRIESNDKNVIYSNIQRSNYKYKPERVLSG CCEEEEECCCCEEECCCCCCCCCCEEEEEECCEECCCCCEEEECCCCCCCCCCHHHHHCC VSNKKGNILGTTVHCLLDNNPQIVNNILEYLDATNEYEDIKQRNKKLQSKVFSEIGVDTN CCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC NMAPLREKHPEVPPMIMLMGTGSESGKTFLASGIVGALREKGIHTYVIKTGPDIRDLSPS CCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCC LYVNKEKLEDYASIQISNIGWTPLEKIIEQVKNKGYDLVLVEGVMSAATGLLNKKTPYST CEEEHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCC AEIAYAGNIPVIMVSSVSKGGIETAAIDIEAHINLLNKMDVKTAGVILNKTYDEGIVEHV EEEEEECCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCHHHCEEEECCHHHHHHHHH SEFLSNKSGIPEDNIWSIGKAKVENKGQVPEDYLQLETFTKAAMDVVKEYVDVTKIMDLA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVPEFRGYLSYEEICDLYKK HCCHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]