Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489001
Identifier: 84489001
GI number: 84489001
Start: 215601
End: 215999
Strand: Direct
Name: 84489001
Synonym: Msp_0173
Alternate gene names: NA
Gene position: 215601-215999 (Clockwise)
Preceding gene: 84489000
Following gene: 84489002
Centisome position: 12.2
GC content: 25.56
Gene sequence:
>399_bases TTGATAAAAATGGAAGAAAAAAATTTAATAATAATATGCACAACAGCTATAATAATAACACTACTGTTTTCAACAACAGT ATTATTTTTAAATAATATTAATAACTCAGTAAATAATTCAATAAATGAAAATAATACTAATAATACAAATTCCATGGATA ATTCAACAACTAATACTACCAAGTCCACATCTAAAACTACTTCAAAAGACACTTCAAGTAAAAGTAGTAGTTTTTCATCA GATACAATTAATGGAGAAAAAATCACTGGAATATATCCCTCTTATGATGAGGATTATGAAAGAATAGCCACTGCTACTAA TAAGTATTATAGAAACAAGAAAACAGGAGTGATATACAAACGTCATCTGGATGATGATGGTGTATATAGATATTATTGA
Upstream 100 bases:
>100_bases TTATAATATCTTCATTTAATAATTATTATTATAGATTCATTCATGTTACTTTTGGAAAGATACAGTGATATAAGTACATT TTTATGTAATAAAAATAGGT
Downstream 100 bases:
>100_bases AATTCTATTATAGAATTCTAATAAATTATTTTTATATAGTCAAACAATAGATTTAATTATAGAATGAAATTTTTAATGTG ATTGTATGACAAAGATAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTTKSTSKTTSKDTSSKSSSFSS DTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYKRHLDDDGVYRYY
Sequences:
>Translated_132_residues MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTTKSTSKTTSKDTSSKSSSFSS DTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYKRHLDDDGVYRYY >Mature_132_residues MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTTKSTSKTTSKDTSSKSSSFSS DTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYKRHLDDDGVYRYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14960; Mature: 14960
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTT CCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCC KSTSKTTSKDTSSKSSSFSSDTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYK CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEE RHLDDDGVYRYY EECCCCCEEECC >Mature Secondary Structure MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTT CCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCC KSTSKTTSKDTSSKSSSFSSDTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYK CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEE RHLDDDGVYRYY EECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA