Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489001

Identifier: 84489001

GI number: 84489001

Start: 215601

End: 215999

Strand: Direct

Name: 84489001

Synonym: Msp_0173

Alternate gene names: NA

Gene position: 215601-215999 (Clockwise)

Preceding gene: 84489000

Following gene: 84489002

Centisome position: 12.2

GC content: 25.56

Gene sequence:

>399_bases
TTGATAAAAATGGAAGAAAAAAATTTAATAATAATATGCACAACAGCTATAATAATAACACTACTGTTTTCAACAACAGT
ATTATTTTTAAATAATATTAATAACTCAGTAAATAATTCAATAAATGAAAATAATACTAATAATACAAATTCCATGGATA
ATTCAACAACTAATACTACCAAGTCCACATCTAAAACTACTTCAAAAGACACTTCAAGTAAAAGTAGTAGTTTTTCATCA
GATACAATTAATGGAGAAAAAATCACTGGAATATATCCCTCTTATGATGAGGATTATGAAAGAATAGCCACTGCTACTAA
TAAGTATTATAGAAACAAGAAAACAGGAGTGATATACAAACGTCATCTGGATGATGATGGTGTATATAGATATTATTGA

Upstream 100 bases:

>100_bases
TTATAATATCTTCATTTAATAATTATTATTATAGATTCATTCATGTTACTTTTGGAAAGATACAGTGATATAAGTACATT
TTTATGTAATAAAAATAGGT

Downstream 100 bases:

>100_bases
AATTCTATTATAGAATTCTAATAAATTATTTTTATATAGTCAAACAATAGATTTAATTATAGAATGAAATTTTTAATGTG
ATTGTATGACAAAGATAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTTKSTSKTTSKDTSSKSSSFSS
DTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYKRHLDDDGVYRYY

Sequences:

>Translated_132_residues
MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTTKSTSKTTSKDTSSKSSSFSS
DTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYKRHLDDDGVYRYY
>Mature_132_residues
MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTTKSTSKTTSKDTSSKSSSFSS
DTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYKRHLDDDGVYRYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14960; Mature: 14960

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTT
CCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCC
KSTSKTTSKDTSSKSSSFSSDTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEE
RHLDDDGVYRYY
EECCCCCEEECC
>Mature Secondary Structure
MIKMEEKNLIIICTTAIIITLLFSTTVLFLNNINNSVNNSINENNTNNTNSMDNSTTNTT
CCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCC
KSTSKTTSKDTSSKSSSFSSDTINGEKITGIYPSYDEDYERIATATNKYYRNKKTGVIYK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEE
RHLDDDGVYRYY
EECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA