| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is glnD [H]
Identifier: 83721536
GI number: 83721536
Start: 2294734
End: 2297310
Strand: Reverse
Name: glnD [H]
Synonym: BTH_I2025
Alternate gene names: 83721536
Gene position: 2297310-2294734 (Counterclockwise)
Preceding gene: 161723130
Following gene: 83719576
Centisome position: 60.31
GC content: 68.57
Gene sequence:
>2577_bases ATGAGCGCATCCGTCGCCGCGCCGCCTCCCGCGCTGTCGCGCAAAGCCGAATTCAAGGCCGCGAAAGCCGAGTTGCTCGC GCGCTTCCAGACCGCGACCAACGTCACGCCGCTGATGCACGCGCTGTCGCGCGCGACCGACGACGCGCTGCGCCGCCTGT GGCACGAATGCGGGCTGCCCGCGACGCTCGCGCTCGTCGCGGTCGGCGGCTTCGGGCGCGGCGAGCTGTCGCCGCACTCG GACGTCGACATTCTCGTGCTGCTGCCCGATGCGCACGCGCGCGAGCTCGACGAACGGATCGAGCGCTTCATCGGCATGGC GTGGGATCTCGGGCTCGAGATCGGCAGCAGCGTGCGCACGGTCGACCAGTGCATCGAGGAGGCGTCGCAGGACGTCACCG TACAGACTTCGCTGCTCGAGGCGCGCCGCATCGTCGGCAGCACGGCGCTCTTCGAGCGCTTCATGCTGCGCTATCGCGAA GCGCTCGACGCGCGCGCGTTCTTCCAGGCGAAGGTGCTCGAGATGCGCCAGCGCCACGCGAAGTTCCAGGACACGCCGTA CAGCCTCGAGCCGAACGTGAAGGAAAGCCCCGGCGGCCTGCGCGATCTGCAGACGATTCTCTGGATCGCGCGCGCGGCGG GTTTCGGCAGCAGTTGGCGCGAGCTCGACACGCGCGGGCTCATCACCGATCGCGAGGCGCGCGAGCTGCGCCGCAACGAA GGCTTCCTGAAGACGCTGCGCGCGCGGCTGCACGTGATCGCCGGGCGGCGCCAGGACATCCTCGTGTTCGATCTGCAGAC TCAGGCGGCCGAGAGCTTCGGCTACCGCCCGACGCCCGCGAAGCGCGCGAGCGAGCAGTTGATGCGGCGTTACTACTGGG CCGCGAAGGCGGTCACGCAGCTCGCGACGATCCTGATCCAGAACATCGAGGCGCAGCTCTTCCCGGCGACGAGCGGCGTC ACGCGCGTGCTGTCGCCCGGGCGCTTCGTCGAGAAGCAGGGCATGCTCGAGATCGCCGCGGACGACGTGTTCGAGCGTCA CCCGGACGCGATCCTCGAAGCGTTCCTGTTGTACGAGGCGACGCGCGGCGTGAAGGGTCTGTCCGCGCGCACGCTGCGCG CGCTCTACAACTCGCGCGACGTGATGAACAACGCGTGGCGGCGCGATCCGCGCAACCGCCATACGTTCATGCAGATCCTG CAGCAACCGGAAGGCATCACGCACGCATTCCGGCTGATGAACCAGACGAGCGTGCTCGGCCGCTATCTGCTGAACTTCCG GCGGATCGTCGGCCAGATGCAGCACGATCTGTATCACGTGTACACGGTCGACCAGCACATTCTGATGGTGCTGCGCAACA TCCGACGCTTCGCGGTCGCCGAGCACGCGCACGAATATCCGTTCTGCAGCCAGCTGATCGTGAACTTCGAGCGGCCGTGG GTGCTGTACGTCGCCGCCCTCTTCCACGACATCGCGAAAGGCCGCGGCGGCGACCACTCGGCGCTCGGGATGACCGACGC GCGACGCTTTTGCCGCGAGCACGGCATCGAAGGCGGCGACGCGGCGCTCGTGGTCTGGCTCGTGCAGCATCACCTGACGA TGAGCCAGGTCGCGCAGAAGCAGGACACGAGCGACCCGGAGGTGATCAAGCGCTTCGCGGACCTCGTCGGCAACGAGCGG CGACTGACGGCGCTGTACCTGCTGACCGTCGCAGACATTCGCGGCACGAGCCCGAAGGTGTGGAACACGTGGAAAGGCAA GCTGCTCGAGGATCTGTATCGCGCGACGCTCGCCGTGCTGGGCGGCGCGCAGCCCGACGCGCATTCGGAGCTGAAGACGC GGCAGGAAGAAGCGCTCGCGCTGCTGCGCCTCGAAACCGTGCCGCCCGACGCGCACCGTGCGCTGTGGGATCAGCTCGAC GTCGGCTACTTCCTGCGCCACGACGCGGCCGACATCGCGTGGCAGACCCGCGTGCTGTACCGGCACGTCGCGGCCGACAC CGCGATCGTCCGCGCACGCCCGTCGCCCGTCGGCGACGCGCTGCAGGTGCTCGTCTACGTGAAGGACCGCTCGGACCTGT TCGCGGGCATCTGCGCGTACTTCGACCGCAACGGGCTGTCGGTGCTCGACGCGCGCGTGAACACGACGCGCCACGGCTAC GCGCTCGACAACTTCATCGTCACGCAGACCGAGCGCGACGTGCAGTACCGCGACATCGCGAACCTCGTCGAGCAGCAGCT CGCCGCGCGCCTCGCCGAGTCGGCGCCGCTGCCCGAGCCGTCGAAGGGGCGGCTCTCGCGGCTGTCGCGCACGTTCCCGA TCACGCCGCGCGTCGACCTGCGGGCCGACGAGCGCGGCCAGTACTACATTCTGTCCGTGTCGGCCAACGACCGGCCGGGC CTTCTTTATTCGATCGCGCGCGTGCTGGCCGAGCACCGGGTCGGCGTCCACGCGGCGCGGATCAATACGCTCGGCGAACG CGTCGAGGACGTCTTCATGCTCGACGGCACCGGCTTGTCCGACAACCGTCTGCAGATCCAAGTCGAAACCGAGTTGCTGC GCGCGATCGCAGTGTGA
Upstream 100 bases:
>100_bases GCCGCAAGCCGCTTCGTTCGCTTCAACCCGCTCGATTTAGCCAGGTAGCCGCTCGCGTCGTCGCGCGCGGCCGTTCAACC GCCCAATCCGATCGCCGCCC
Downstream 100 bases:
>100_bases ATATTCGAGCGTTTATGCGCACAAAATTGACCGTCAAGAATCCGCGCCCGGCCGCACCCGGCCGCGCCCCCGTCCGTTCC GGCAGCCTCACCGCGCGCAA
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MSASVAAPPPALSRKAEFKAAKAELLARFQTATNVTPLMHALSRATDDALRRLWHECGLPATLALVAVGGFGRGELSPHS DVDILVLLPDAHARELDERIERFIGMAWDLGLEIGSSVRTVDQCIEEASQDVTVQTSLLEARRIVGSTALFERFMLRYRE ALDARAFFQAKVLEMRQRHAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAAGFGSSWRELDTRGLITDREARELRRNE GFLKTLRARLHVIAGRRQDILVFDLQTQAAESFGYRPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGV TRVLSPGRFVEKQGMLEIAADDVFERHPDAILEAFLLYEATRGVKGLSARTLRALYNSRDVMNNAWRRDPRNRHTFMQIL QQPEGITHAFRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFAVAEHAHEYPFCSQLIVNFERPW VLYVAALFHDIAKGRGGDHSALGMTDARRFCREHGIEGGDAALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGNER RLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGAQPDAHSELKTRQEEALALLRLETVPPDAHRALWDQLD VGYFLRHDAADIAWQTRVLYRHVAADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVNTTRHGY ALDNFIVTQTERDVQYRDIANLVEQQLAARLAESAPLPEPSKGRLSRLSRTFPITPRVDLRADERGQYYILSVSANDRPG LLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVETELLRAIAV
Sequences:
>Translated_858_residues MSASVAAPPPALSRKAEFKAAKAELLARFQTATNVTPLMHALSRATDDALRRLWHECGLPATLALVAVGGFGRGELSPHS DVDILVLLPDAHARELDERIERFIGMAWDLGLEIGSSVRTVDQCIEEASQDVTVQTSLLEARRIVGSTALFERFMLRYRE ALDARAFFQAKVLEMRQRHAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAAGFGSSWRELDTRGLITDREARELRRNE GFLKTLRARLHVIAGRRQDILVFDLQTQAAESFGYRPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGV TRVLSPGRFVEKQGMLEIAADDVFERHPDAILEAFLLYEATRGVKGLSARTLRALYNSRDVMNNAWRRDPRNRHTFMQIL QQPEGITHAFRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFAVAEHAHEYPFCSQLIVNFERPW VLYVAALFHDIAKGRGGDHSALGMTDARRFCREHGIEGGDAALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGNER RLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGAQPDAHSELKTRQEEALALLRLETVPPDAHRALWDQLD VGYFLRHDAADIAWQTRVLYRHVAADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVNTTRHGY ALDNFIVTQTERDVQYRDIANLVEQQLAARLAESAPLPEPSKGRLSRLSRTFPITPRVDLRADERGQYYILSVSANDRPG LLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVETELLRAIAV >Mature_857_residues SASVAAPPPALSRKAEFKAAKAELLARFQTATNVTPLMHALSRATDDALRRLWHECGLPATLALVAVGGFGRGELSPHSD VDILVLLPDAHARELDERIERFIGMAWDLGLEIGSSVRTVDQCIEEASQDVTVQTSLLEARRIVGSTALFERFMLRYREA LDARAFFQAKVLEMRQRHAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAAGFGSSWRELDTRGLITDREARELRRNEG FLKTLRARLHVIAGRRQDILVFDLQTQAAESFGYRPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGVT RVLSPGRFVEKQGMLEIAADDVFERHPDAILEAFLLYEATRGVKGLSARTLRALYNSRDVMNNAWRRDPRNRHTFMQILQ QPEGITHAFRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFAVAEHAHEYPFCSQLIVNFERPWV LYVAALFHDIAKGRGGDHSALGMTDARRFCREHGIEGGDAALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGNERR LTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGAQPDAHSELKTRQEEALALLRLETVPPDAHRALWDQLDV GYFLRHDAADIAWQTRVLYRHVAADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVNTTRHGYA LDNFIVTQTERDVQYRDIANLVEQQLAARLAESAPLPEPSKGRLSRLSRTFPITPRVDLRADERGQYYILSVSANDRPGL LYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVETELLRAIAV
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=842, Percent_Identity=36.104513064133, Blast_Score=504, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 96881; Mature: 96750
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVAAPPPALSRKAEFKAAKAELLARFQTATNVTPLMHALSRATDDALRRLWHECGLP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH ATLALVAVGGFGRGELSPHSDVDILVLLPDAHARELDERIERFIGMAWDLGLEIGSSVRT HHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VDQCIEEASQDVTVQTSLLEARRIVGSTALFERFMLRYREALDARAFFQAKVLEMRQRHA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KFQDTPYSLEPNVKESPGGLRDLQTILWIARAAGFGSSWRELDTRGLITDREARELRRNE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCC GFLKTLRARLHVIAGRRQDILVFDLQTQAAESFGYRPTPAKRASEQLMRRYYWAAKAVTQ HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LATILIQNIEAQLFPATSGVTRVLSPGRFVEKQGMLEIAADDVFERHPDAILEAFLLYEA HHHHHHHHHHHHEECCCCCHHHHCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH TRGVKGLSARTLRALYNSRDVMNNAWRRDPRNRHTFMQILQQPEGITHAFRLMNQTSVLG HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFAVAEHAHEYPFCSQLIVNFERPW HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH VLYVAALFHDIAKGRGGDHSALGMTDARRFCREHGIEGGDAALVVWLVQHHLTMSQVAQK HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH QDTSDPEVIKRFADLVGNERRLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH GGAQPDAHSELKTRQEEALALLRLETVPPDAHRALWDQLDVGYFLRHDAADIAWQTRVLY CCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH RHVAADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVNTTRHGY HHHHHHHHEEECCCCCHHHHHEEEEEEECCHHHHHHHHHHHCCCCCEEEEHHHCCCCCCC ALDNFIVTQTERDVQYRDIANLVEQQLAARLAESAPLPEPSKGRLSRLSRTFPITPRVDL CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC RADERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLS CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCC DNRLQIQVETELLRAIAV CCEEEEEEHHHHHHHHCC >Mature Secondary Structure SASVAAPPPALSRKAEFKAAKAELLARFQTATNVTPLMHALSRATDDALRRLWHECGLP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH ATLALVAVGGFGRGELSPHSDVDILVLLPDAHARELDERIERFIGMAWDLGLEIGSSVRT HHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VDQCIEEASQDVTVQTSLLEARRIVGSTALFERFMLRYREALDARAFFQAKVLEMRQRHA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KFQDTPYSLEPNVKESPGGLRDLQTILWIARAAGFGSSWRELDTRGLITDREARELRRNE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCC GFLKTLRARLHVIAGRRQDILVFDLQTQAAESFGYRPTPAKRASEQLMRRYYWAAKAVTQ HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LATILIQNIEAQLFPATSGVTRVLSPGRFVEKQGMLEIAADDVFERHPDAILEAFLLYEA HHHHHHHHHHHHEECCCCCHHHHCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH TRGVKGLSARTLRALYNSRDVMNNAWRRDPRNRHTFMQILQQPEGITHAFRLMNQTSVLG HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFAVAEHAHEYPFCSQLIVNFERPW HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH VLYVAALFHDIAKGRGGDHSALGMTDARRFCREHGIEGGDAALVVWLVQHHLTMSQVAQK HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH QDTSDPEVIKRFADLVGNERRLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH GGAQPDAHSELKTRQEEALALLRLETVPPDAHRALWDQLDVGYFLRHDAADIAWQTRVLY CCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH RHVAADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVNTTRHGY HHHHHHHHEEECCCCCHHHHHEEEEEEECCHHHHHHHHHHHCCCCCEEEEHHHCCCCCCC ALDNFIVTQTERDVQYRDIANLVEQQLAARLAESAPLPEPSKGRLSRLSRTFPITPRVDL CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC RADERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLS CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCC DNRLQIQVETELLRAIAV CCEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA