| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is map-2 [H]
Identifier: 161723130
GI number: 161723130
Start: 2297435
End: 2298250
Strand: Reverse
Name: map-2 [H]
Synonym: BTH_I2026
Alternate gene names: 161723130
Gene position: 2298250-2297435 (Counterclockwise)
Preceding gene: 83719699
Following gene: 83721536
Centisome position: 60.33
GC content: 64.46
Gene sequence:
>816_bases ATGGCTATTACGCTCAAAAACGAACACGACATCGCGCAGATGCGCATCGCCTGCCGTCTCGCGAGCGAAGTGCTCGACTA CATCACGCCGTTCGTCGTCGCCGGCGTGACGACGGGCGAACTCGACCGCCTCTGCCACGAGTACATGATCAATGTGCAGG GTACGGTGCCCGCGCCGCTCAACTACCAGCCGCCGGGCTATCCGCCGTTCCCGAAGGCGATCTGCACTTCGGTCAACGAC GTGATCTGCCACGGCATTCCGGGCGACAAGACGCTGAAGAACGGCGACGCGCTGAACATCGACATCACCGTCATCAAGAA CGGCTATTTCGGCGACACGAGCCGGATGTTCCTCATCGGCGAGGGCTCGATCCTCGCGAAGCGCCTCGTGCAAACCACCT ACGAATGCATGTGGCTCGGCATCGACCAGGTGAAGCCCGGCGCGCATCTCGGCGACATCGGCCACGCAATTCAGAAGCAT GCGGAGGCGCAAGGCTACAGCGTCGTGCGCGAATACTGCGGCCACGGCATCGGCACGGTGTTCCATGAAGATCCGCAGGT CGTCCACTACGGACGCCCCGGCACGGGCATCGAGCTCAAGCCGGGCATGATCTTCACGATCGAGCCGATGATCAACGCCG GCAAGCGCGACATCCGTACGATGCCCGACCAGTGGACCGTCAAGACCCGCGACCGCAGCCTGTCCGCGCAGTGGGAGCAC ACGATTCTCGTCACCGAAACAGGCCACGAGGTGCTGACGGTGTCGGCCGGCACGCCGGCGCGCCCGACGTTCGCCGCGCC GGCGACGGCGGCCTGA
Upstream 100 bases:
>100_bases ATTCGCGCCAGAATTCGTGCTGCGACGGCCCGCGAAGGGCTGCGACGGCTGGAATAAGGTGCGATAATTGCGCAATTCAC CGCATTTCAGGCATCGACTC
Downstream 100 bases:
>100_bases GCGGCTGCGGCGCGCCTCGCGTGCGCCGCAAGCCGCTTCGTTCGCTTCAACCCGCTCGATTTAGCCAGGTAGCCGCTCGC GTCGTCGCGCGCGGCCGTTC
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAITLKNEHDIAQMRIACRLASEVLDYITPFVVAGVTTGELDRLCHEYMINVQGTVPAPLNYQPPGYPPFPKAICTSVND VICHGIPGDKTLKNGDALNIDITVIKNGYFGDTSRMFLIGEGSILAKRLVQTTYECMWLGIDQVKPGAHLGDIGHAIQKH AEAQGYSVVREYCGHGIGTVFHEDPQVVHYGRPGTGIELKPGMIFTIEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWEH TILVTETGHEVLTVSAGTPARPTFAAPATAA
Sequences:
>Translated_271_residues MAITLKNEHDIAQMRIACRLASEVLDYITPFVVAGVTTGELDRLCHEYMINVQGTVPAPLNYQPPGYPPFPKAICTSVND VICHGIPGDKTLKNGDALNIDITVIKNGYFGDTSRMFLIGEGSILAKRLVQTTYECMWLGIDQVKPGAHLGDIGHAIQKH AEAQGYSVVREYCGHGIGTVFHEDPQVVHYGRPGTGIELKPGMIFTIEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWEH TILVTETGHEVLTVSAGTPARPTFAAPATAA >Mature_270_residues AITLKNEHDIAQMRIACRLASEVLDYITPFVVAGVTTGELDRLCHEYMINVQGTVPAPLNYQPPGYPPFPKAICTSVNDV ICHGIPGDKTLKNGDALNIDITVIKNGYFGDTSRMFLIGEGSILAKRLVQTTYECMWLGIDQVKPGAHLGDIGHAIQKHA EAQGYSVVREYCGHGIGTVFHEDPQVVHYGRPGTGIELKPGMIFTIEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWEHT ILVTETGHEVLTVSAGTPARPTFAAPATAA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=264, Percent_Identity=50, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI40385867, Length=252, Percent_Identity=40.0793650793651, Blast_Score=191, Evalue=4e-49, Organism=Escherichia coli, GI1786364, Length=255, Percent_Identity=58.8235294117647, Blast_Score=317, Evalue=4e-88, Organism=Escherichia coli, GI1788728, Length=254, Percent_Identity=25.9842519685039, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71996291, Length=252, Percent_Identity=47.2222222222222, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6323273, Length=253, Percent_Identity=45.8498023715415, Blast_Score=223, Evalue=2e-59, Organism=Drosophila melanogaster, GI21355531, Length=262, Percent_Identity=46.5648854961832, Blast_Score=227, Evalue=6e-60, Organism=Drosophila melanogaster, GI24583427, Length=249, Percent_Identity=39.3574297188755, Blast_Score=192, Evalue=1e-49,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29577; Mature: 29446
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITLKNEHDIAQMRIACRLASEVLDYITPFVVAGVTTGELDRLCHEYMINVQGTVPAPL CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCC NYQPPGYPPFPKAICTSVNDVICHGIPGDKTLKNGDALNIDITVIKNGYFGDTSRMFLIG CCCCCCCCCCHHHHHCCCCHHEEECCCCCCEECCCCEEEEEEEEEECCCCCCCCEEEEEE EGSILAKRLVQTTYECMWLGIDQVKPGAHLGDIGHAIQKHAEAQGYSVVREYCGHGIGTV CCHHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE FHEDPQVVHYGRPGTGIELKPGMIFTIEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWEH EECCCCEEEECCCCCCEEECCCEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCEEE TILVTETGHEVLTVSAGTPARPTFAAPATAA EEEEEECCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure AITLKNEHDIAQMRIACRLASEVLDYITPFVVAGVTTGELDRLCHEYMINVQGTVPAPL EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCC NYQPPGYPPFPKAICTSVNDVICHGIPGDKTLKNGDALNIDITVIKNGYFGDTSRMFLIG CCCCCCCCCCHHHHHCCCCHHEEECCCCCCEECCCCEEEEEEEEEECCCCCCCCEEEEEE EGSILAKRLVQTTYECMWLGIDQVKPGAHLGDIGHAIQKHAEAQGYSVVREYCGHGIGTV CCHHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE FHEDPQVVHYGRPGTGIELKPGMIFTIEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWEH EECCCCEEEECCCCCCEEECCCEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCEEE TILVTETGHEVLTVSAGTPARPTFAAPATAA EEEEEECCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]