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The map label for this gene is ychE [C]

Identifier: 83593853

GI number: 83593853

Start: 2928767

End: 2929402

Strand: Direct

Name: ychE [C]

Synonym: Rru_A2518

Alternate gene names: 83593853

Gene position: 2928767-2929402 (Clockwise)

Preceding gene: 83593851

Following gene: 83593855

Centisome position: 67.28

GC content: 64.31

Gene sequence:

>636_bases
ATGATCGATTCCTTGTTATCGCAGATCACCACCTTGCTCGTTCTTGTCGATCCGCTGGGTCTGCTGGCGATTTTCGTCGG
GCTGACCGCCGGGCGACCGGCGGCCTATCGCCGTCAGGTGGCGATCAAGGGTACCTTGCTCGCCACCTTCGTGCTCGTCG
CCTTCGCCGTGGCCGGCGGTAAATTCCTGCATTTGCTGGGGATCGACATCTCGGCCTTCCGTATCGCCGGCGGCCTGATG
CTGCTGGTGCTGGCCCATGAGATGATCTTCGCCAAGCGCACCATCCGCCGCAACGAAAGCGCCAAGGCCATGGACAAGGA
GATGGGCGGCGAAACCTCCGATCCCAGCGTCTTTCCCTTGGCCATCCCGCTGATCGCCGGTCCCGGGGCGATCACCGCCG
TGTTGCTGTTCTCGCGCGAAAGCGATGGCACCGCCATTGGCCTGATGTGGGTGATCGTCGCCATTCTGGCCGTGACCTTG
CCCACGCTCGCCCTTCTGCTGACCGCCGGGGCGGTCCAGCGCATGCTGGGCGAAACCCTGACCCATACGCTCGACCGCCT
GCTCGGCATTATCCTGGGCGCCTTGGCCGTCCAGTTCATCATCAGCGGCGCCAAGGAGGCCCTGGGCGCCCTGTAA

Upstream 100 bases:

>100_bases
TTATCGGCCATGCACTGGCAGGCTTTCAACCCCCGGCTTGCCTCGGCCCTCCCCTCCCCCCACTTGCGGGGAGAGCGTCA
CTCCCGCTTCGGATTCCCCC

Downstream 100 bases:

>100_bases
CCCCCCCGGCCGGGCCTCCGGCCGCCGTCATCAGTACTTGGCAATCACCCAGATGGCATGCACGATACCGGGGATATAGC
CCAGCAAGGTCAACAGAACG

Product: multiple antibiotic resistance (MarC)-like proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIDSLLSQITTLLVLVDPLGLLAIFVGLTAGRPAAYRRQVAIKGTLLATFVLVAFAVAGGKFLHLLGIDISAFRIAGGLM
LLVLAHEMIFAKRTIRRNESAKAMDKEMGGETSDPSVFPLAIPLIAGPGAITAVLLFSRESDGTAIGLMWVIVAILAVTL
PTLALLLTAGAVQRMLGETLTHTLDRLLGIILGALAVQFIISGAKEALGAL

Sequences:

>Translated_211_residues
MIDSLLSQITTLLVLVDPLGLLAIFVGLTAGRPAAYRRQVAIKGTLLATFVLVAFAVAGGKFLHLLGIDISAFRIAGGLM
LLVLAHEMIFAKRTIRRNESAKAMDKEMGGETSDPSVFPLAIPLIAGPGAITAVLLFSRESDGTAIGLMWVIVAILAVTL
PTLALLLTAGAVQRMLGETLTHTLDRLLGIILGALAVQFIISGAKEALGAL
>Mature_211_residues
MIDSLLSQITTLLVLVDPLGLLAIFVGLTAGRPAAYRRQVAIKGTLLATFVLVAFAVAGGKFLHLLGIDISAFRIAGGLM
LLVLAHEMIFAKRTIRRNESAKAMDKEMGGETSDPSVFPLAIPLIAGPGAITAVLLFSRESDGTAIGLMWVIVAILAVTL
PTLALLLTAGAVQRMLGETLTHTLDRLLGIILGALAVQFIISGAKEALGAL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=198, Percent_Identity=31.3131313131313, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1789842, Length=204, Percent_Identity=30.3921568627451, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=28.0612244897959, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22050; Mature: 22050

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSLLSQITTLLVLVDPLGLLAIFVGLTAGRPAAYRRQVAIKGTLLATFVLVAFAVAGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFLHLLGIDISAFRIAGGLMLLVLAHEMIFAKRTIRRNESAKAMDKEMGGETSDPSVFPL
CEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHH
AIPLIAGPGAITAVLLFSRESDGTAIGLMWVIVAILAVTLPTLALLLTAGAVQRMLGETL
HHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
THTLDRLLGIILGALAVQFIISGAKEALGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDSLLSQITTLLVLVDPLGLLAIFVGLTAGRPAAYRRQVAIKGTLLATFVLVAFAVAGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFLHLLGIDISAFRIAGGLMLLVLAHEMIFAKRTIRRNESAKAMDKEMGGETSDPSVFPL
CEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHH
AIPLIAGPGAITAVLLFSRESDGTAIGLMWVIVAILAVTLPTLALLLTAGAVQRMLGETL
HHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
THTLDRLLGIILGALAVQFIISGAKEALGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]