Click here to switch to the map view.

The map label for this gene is cbbE [H]

Identifier: 83593737

GI number: 83593737

Start: 2797138

End: 2797824

Strand: Direct

Name: cbbE [H]

Synonym: Rru_A2402

Alternate gene names: 83593737

Gene position: 2797138-2797824 (Clockwise)

Preceding gene: 83593734

Following gene: 83593738

Centisome position: 64.26

GC content: 65.65

Gene sequence:

>687_bases
ATGACCCGCGCCATCCGTATCGCGCCAAGCTTGTTGTCCGCGGATTTCGCCTTTCTCGGCCGCGATGCCCAAGCCATGGC
CGACGGCGGAGCCGATATTTTGCACTTCGACGTCATGGACAACCACTATGTGCCCAACCTGACGGTGGGCCCGCTGGTCT
GTGCCGCCCTGCGTCCGCATACCTCCTTGCCGATCGATGTCCACCTGATGACGCGGCCGGTCGATCCGCTGATCGATTCC
TTCGCCGAGGCCGGGGCCGATATGATCACCTTCCACCCGGAAGCCAGCGATCACGTCCACCGCAGCGTTCAGATGATTCG
CAAGCGCGGGCTGAAGGCCGGGGTGGCGCTTAATCCGGCCTCGCCGCTCAGCCTGCTCGACCACATCCTCGAAGACCTCG
ACTTGGTGCTGATCATGTCGGTCAACCCGGGGTTCGGCGGCCAGAGCTTCATTCCCTCGGCCCTGCCCAAGATCGCCGCC
CTGCGCAAACGGATCGACGACGCCGGCTTGCCGGTGGCGATCGAAGTCGACGGCGGGGTCAATCCCGCCAATGCCCGGGC
GCTCGGCGCCGCCGGGGCCGATATCCTGGTGGCCGGTTCGGCCATCTTCGGAGCGAGTGACCGGGCCAAGGCCATCGCCT
CCATCCGGGGCGCCGCGGAAAGTGGATTAGGTCAGGAAGCCGCATAA

Upstream 100 bases:

>100_bases
TAACTTTGTTGTGTTTATGTGTCCGTCCCGCCAGAATTTCCATGGTGGATTTAGGGGTTCACAAGGCCCCAACCCCTCCC
ACCCATCAGGAGACGCCGTC

Downstream 100 bases:

>100_bases
ATGTCCGTTCTGTCACAGGACCGTCCGCGCGAAAGGCCTCCCATGCTCGCCACCGATCGCACCACGCTTGCGCAGTTCCT
TGTCGAGGAATGCCGGGGCC

Product: ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDS
FAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAA
LRKRIDDAGLPVAIEVDGGVNPANARALGAAGADILVAGSAIFGASDRAKAIASIRGAAESGLGQEAA

Sequences:

>Translated_228_residues
MTRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDS
FAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAA
LRKRIDDAGLPVAIEVDGGVNPANARALGAAGADILVAGSAIFGASDRAKAIASIRGAAESGLGQEAA
>Mature_227_residues
TRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDSF
AEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAAL
RKRIDDAGLPVAIEVDGGVNPANARALGAAGADILVAGSAIFGASDRAKAIASIRGAAESGLGQEAA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=221, Percent_Identity=37.5565610859729, Blast_Score=154, Evalue=6e-38,
Organism=Homo sapiens, GI219879828, Length=218, Percent_Identity=36.2385321100917, Blast_Score=141, Evalue=4e-34,
Organism=Homo sapiens, GI24307923, Length=171, Percent_Identity=30.9941520467836, Blast_Score=92, Evalue=4e-19,
Organism=Escherichia coli, GI1789788, Length=211, Percent_Identity=57.8199052132701, Blast_Score=257, Evalue=6e-70,
Organism=Escherichia coli, GI1790523, Length=199, Percent_Identity=39.6984924623116, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1790754, Length=209, Percent_Identity=31.5789473684211, Blast_Score=94, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=233, Percent_Identity=38.6266094420601, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=230, Percent_Identity=35.6521739130435, Blast_Score=157, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24586301, Length=219, Percent_Identity=38.3561643835616, Blast_Score=164, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23657; Mature: 23526

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPH
CCCEEEECHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC
TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA
CCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCC
SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALRKRIDDAGLPVAIEVDGGV
CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NPANARALGAAGADILVAGSAIFGASDRAKAIASIRGAAESGLGQEAA
CCCCCCCCCCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPH
CCEEEECHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCC
TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA
CCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCC
SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALRKRIDDAGLPVAIEVDGGV
CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NPANARALGAAGADILVAGSAIFGASDRAKAIASIRGAAESGLGQEAA
CCCCCCCCCCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8349547; 8616224 [H]