Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593734
Identifier: 83593734
GI number: 83593734
Start: 2793292
End: 2794389
Strand: Direct
Name: 83593734
Synonym: Rru_A2399
Alternate gene names: NA
Gene position: 2793292-2794389 (Clockwise)
Preceding gene: 83593733
Following gene: 83593737
Centisome position: 64.17
GC content: 59.84
Gene sequence:
>1098_bases GTGTTGAACCATTCTTCCCTTGGATATGTTCAGGATGCCCAGGGGTTTGTTTTCATCTCCGGGTTGATCGTTGGGCTCTA TTACGCCAAAGGCTATCTCAAGGGACGCAGCCTCGAGATGGACACCAAGATCTATGCCCGGGCCGGGCTGCTCTATCGCT ACAGCCTTGTGCTGCTGGGATTGCTGTTTGTGCTGCCCTTGGTGTTTCCGACCTTCGCCGCGCCCTGGGAACGCTTCTAT GCCGATTTTTTCCGCGATCCTTTGACCATCGGCATGGGGGCGCTGATCTTGCTCTACCAGCCGACCTATATGGATATTCT GCCCCAATACATCTTGTACCTGCTGCTAACGCCCTTTCTCATCCGCCTCGCCCTTAACGGCAAAGGGGTTCAGGTGCTGG GCGGCAGCATCGCGGTCTGGCTGCTGACCCAGATCGGCGCCCATACCCTGCTGATCACTGCCATCGAGGAGGCCGGCCAG AGCGTCGCCCCCGATTTCATCACCCGCGCCGGCTTCAATCCCATGGGCTGGCAGTTGCTCTTCGTCTCCGGTCTGGTCAT CGGCGCCGGACTGACCAAGGGGACCTTGAAGATCGGCGACTGGTTCGACGCCTCGCGCCCCGGCCCCGCCCTGACCTCGC TGGCCCTTGTCGTCTATTTCATGGTGATGCGCCTAGGCTTCACCTTCGACTACCTGCCCGACCACGTGGTCCAGGCCTTC CGGATGCTCGACCACCGGACCACCTTCAGCCTGATCTATCCGATCAACTTTTTAGCCCTGGGCTATCTGGTGACCTGGCT GATCATCTGCGGCCCCCACGCGGCCTCGCCGATCGTGCAAAAAGCCGGCTGGGTGCTCAAAGGCTTGTTCATGATGGAGT TCCTGCGCTTCCTTGGCCGCCATTCGCTGCAGGTCTACGCCTTCCATCTGGTCCTGGTCTTCGCCATGTATTTCGTTGAT TTCTATACGGAGGAGTTCAACGAGGTCGCCAAGACCGGCATCGTGCTGTCGGGCGTCGCCCTGCTCGCCGTTCCGGCTTG GCTGCATGAGCAAAAGCAAAAGGCCAAAACTGCCCAAAGGGCCGCCGCCCGCACCTGA
Upstream 100 bases:
>100_bases CCAGATGAAAAGACTAGATATCCTGGATGGATTTCGGGGTTATTTCCTCGTTTTCATGATGGTCAACCACCTGACACTGC AAGGTGGGTCGATCATAAGC
Downstream 100 bases:
>100_bases CCCGTCGAGGCCCATCTCGGGCCCCATCGAAAAAGCTCAAAAAAAGACGCGGAGGGGAGAGCCTCCGCGTCTTCTGCTTT GACCGGCCGTCCAACCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MLNHSSLGYVQDAQGFVFISGLIVGLYYAKGYLKGRSLEMDTKIYARAGLLYRYSLVLLGLLFVLPLVFPTFAAPWERFY ADFFRDPLTIGMGALILLYQPTYMDILPQYILYLLLTPFLIRLALNGKGVQVLGGSIAVWLLTQIGAHTLLITAIEEAGQ SVAPDFITRAGFNPMGWQLLFVSGLVIGAGLTKGTLKIGDWFDASRPGPALTSLALVVYFMVMRLGFTFDYLPDHVVQAF RMLDHRTTFSLIYPINFLALGYLVTWLIICGPHAASPIVQKAGWVLKGLFMMEFLRFLGRHSLQVYAFHLVLVFAMYFVD FYTEEFNEVAKTGIVLSGVALLAVPAWLHEQKQKAKTAQRAAART
Sequences:
>Translated_365_residues MLNHSSLGYVQDAQGFVFISGLIVGLYYAKGYLKGRSLEMDTKIYARAGLLYRYSLVLLGLLFVLPLVFPTFAAPWERFY ADFFRDPLTIGMGALILLYQPTYMDILPQYILYLLLTPFLIRLALNGKGVQVLGGSIAVWLLTQIGAHTLLITAIEEAGQ SVAPDFITRAGFNPMGWQLLFVSGLVIGAGLTKGTLKIGDWFDASRPGPALTSLALVVYFMVMRLGFTFDYLPDHVVQAF RMLDHRTTFSLIYPINFLALGYLVTWLIICGPHAASPIVQKAGWVLKGLFMMEFLRFLGRHSLQVYAFHLVLVFAMYFVD FYTEEFNEVAKTGIVLSGVALLAVPAWLHEQKQKAKTAQRAAART >Mature_365_residues MLNHSSLGYVQDAQGFVFISGLIVGLYYAKGYLKGRSLEMDTKIYARAGLLYRYSLVLLGLLFVLPLVFPTFAAPWERFY ADFFRDPLTIGMGALILLYQPTYMDILPQYILYLLLTPFLIRLALNGKGVQVLGGSIAVWLLTQIGAHTLLITAIEEAGQ SVAPDFITRAGFNPMGWQLLFVSGLVIGAGLTKGTLKIGDWFDASRPGPALTSLALVVYFMVMRLGFTFDYLPDHVVQAF RMLDHRTTFSLIYPINFLALGYLVTWLIICGPHAASPIVQKAGWVLKGLFMMEFLRFLGRHSLQVYAFHLVLVFAMYFVD FYTEEFNEVAKTGIVLSGVALLAVPAWLHEQKQKAKTAQRAAART
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40765; Mature: 40765
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNHSSLGYVQDAQGFVFISGLIVGLYYAKGYLKGRSLEMDTKIYARAGLLYRYSLVLLG CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LLFVLPLVFPTFAAPWERFYADFFRDPLTIGMGALILLYQPTYMDILPQYILYLLLTPFL HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IRLALNGKGVQVLGGSIAVWLLTQIGAHTLLITAIEEAGQSVAPDFITRAGFNPMGWQLL HHHHCCCCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHH FVSGLVIGAGLTKGTLKIGDWFDASRPGPALTSLALVVYFMVMRLGFTFDYLPDHVVQAF HHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHH RMLDHRTTFSLIYPINFLALGYLVTWLIICGPHAASPIVQKAGWVLKGLFMMEFLRFLGR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC HSLQVYAFHLVLVFAMYFVDFYTEEFNEVAKTGIVLSGVALLAVPAWLHEQKQKAKTAQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAART HHCCC >Mature Secondary Structure MLNHSSLGYVQDAQGFVFISGLIVGLYYAKGYLKGRSLEMDTKIYARAGLLYRYSLVLLG CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LLFVLPLVFPTFAAPWERFYADFFRDPLTIGMGALILLYQPTYMDILPQYILYLLLTPFL HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IRLALNGKGVQVLGGSIAVWLLTQIGAHTLLITAIEEAGQSVAPDFITRAGFNPMGWQLL HHHHCCCCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHH FVSGLVIGAGLTKGTLKIGDWFDASRPGPALTSLALVVYFMVMRLGFTFDYLPDHVVQAF HHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHH RMLDHRTTFSLIYPINFLALGYLVTWLIICGPHAASPIVQKAGWVLKGLFMMEFLRFLGR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC HSLQVYAFHLVLVFAMYFVDFYTEEFNEVAKTGIVLSGVALLAVPAWLHEQKQKAKTAQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAART HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA