Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is fbp [H]
Identifier: 83593738
GI number: 83593738
Start: 2797825
End: 2798934
Strand: Direct
Name: fbp [H]
Synonym: Rru_A2403
Alternate gene names: 83593738
Gene position: 2797825-2798934 (Clockwise)
Preceding gene: 83593737
Following gene: 83593739
Centisome position: 64.28
GC content: 64.86
Gene sequence:
>1110_bases ATGTCCGTTCTGTCACAGGACCGTCCGCGCGAAAGGCCTCCCATGCTCGCCACCGATCGCACCACGCTTGCGCAGTTCCT TGTCGAGGAATGCCGGGGCCGCGCCGGCGATGATTCCGAGCTTCTTGGTTTGTTGCTCGACGTCGCCCAGGCCTGCAAGA CCATCTCGAAGATGACGGCGATGGGCTCGCTCGCCGGGGTTCATGGCTATAACGGCGATGTCAATCCCCAGGGCGAGAAT CAGGCGCGGCTCGACCTGATGTCCAATCAGGCCTTCGTCCGCGCCACCGAACGCACCGGCCATGCCGCCGGTCTGGCCAG CGAGGAGATGGAAGAGGTTCTGGGCTTCCCCGAGTCCTACGCCCGGGGCACCTTGCTGCTGGTCTTCGATCCCCTCGACG GATCGTCCAACATCGATATCAACGGCACCGTCGGCTCGATCTTTTCGATCCTGCCGATGCCCCGCCCCGGCGAAGCCCCG CAGACCGCCGACTTCCTGCAATCGGGCCGCCAGCAGGTGGCCGCCGGCTATGCCCTTTATGGCCCCTCGACCATGTTCGT GCTGACCATCGGCTCGGGCGTTCACGGCTTCACCCTCGATCCGCTGCTTGGCGATTTCATTCTGACCCACCCGTCGATGA CGGTGATCCCCGAAAGCGGCGAATTCGCCATCAACAGCTCGAACAGCCGCTTCTGGGAACCGCCGATCCGCGCCTATGTC GATGAATTGCTGGCCGGGCGCTCGGGTCCGCGGTCCAAGGATTACAACATGCGCTGGATCGCCGCCCTGGTGGCCGATGT CCACCGCATCTTGCTGCGCGGCGGCATCTATCTGTATCCCCGCGACACCAAGACCCCCGATCTGGCCGGGCGCCTGCGCC TGCTCTATGAAGCCGCCCCGGTGGCCTTTTTGATGGAACAGGCTGGCGGCCGCTGCACCACCGGCACGCGGACCATGCTC GACCTCGTGCCCGGGTCCTTGCACGAACGCGTACCGCTGATCTTCGGGTCGGCCGTGGAAGTGGAGCGGGTCGAGACCCT TTACCGCGAGCCGCAACGCCGGGAATTCGCCACGCCGTTGTTCAATCAGCGCGGCTTGTTCCGCGACTAA
Upstream 100 bases:
>100_bases GGTGGCCGGTTCGGCCATCTTCGGAGCGAGTGACCGGGCCAAGGCCATCGCCTCCATCCGGGGCGCCGCGGAAAGTGGAT TAGGTCAGGAAGCCGCATAA
Downstream 100 bases:
>100_bases AGCGGCGTACCGCCGACCGGGGACGTCGGCGCTTACACCATCGTCACCAAAAAAGCGGCAGAGCGGTCAGATCACCACCG CTCGACAGGGGGAAGCACGA
Product: D-fructose 1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSVLSQDRPRERPPMLATDRTTLAQFLVEECRGRAGDDSELLGLLLDVAQACKTISKMTAMGSLAGVHGYNGDVNPQGEN QARLDLMSNQAFVRATERTGHAAGLASEEMEEVLGFPESYARGTLLLVFDPLDGSSNIDINGTVGSIFSILPMPRPGEAP QTADFLQSGRQQVAAGYALYGPSTMFVLTIGSGVHGFTLDPLLGDFILTHPSMTVIPESGEFAINSSNSRFWEPPIRAYV DELLAGRSGPRSKDYNMRWIAALVADVHRILLRGGIYLYPRDTKTPDLAGRLRLLYEAAPVAFLMEQAGGRCTTGTRTML DLVPGSLHERVPLIFGSAVEVERVETLYREPQRREFATPLFNQRGLFRD
Sequences:
>Translated_369_residues MSVLSQDRPRERPPMLATDRTTLAQFLVEECRGRAGDDSELLGLLLDVAQACKTISKMTAMGSLAGVHGYNGDVNPQGEN QARLDLMSNQAFVRATERTGHAAGLASEEMEEVLGFPESYARGTLLLVFDPLDGSSNIDINGTVGSIFSILPMPRPGEAP QTADFLQSGRQQVAAGYALYGPSTMFVLTIGSGVHGFTLDPLLGDFILTHPSMTVIPESGEFAINSSNSRFWEPPIRAYV DELLAGRSGPRSKDYNMRWIAALVADVHRILLRGGIYLYPRDTKTPDLAGRLRLLYEAAPVAFLMEQAGGRCTTGTRTML DLVPGSLHERVPLIFGSAVEVERVETLYREPQRREFATPLFNQRGLFRD >Mature_368_residues SVLSQDRPRERPPMLATDRTTLAQFLVEECRGRAGDDSELLGLLLDVAQACKTISKMTAMGSLAGVHGYNGDVNPQGENQ ARLDLMSNQAFVRATERTGHAAGLASEEMEEVLGFPESYARGTLLLVFDPLDGSSNIDINGTVGSIFSILPMPRPGEAPQ TADFLQSGRQQVAAGYALYGPSTMFVLTIGSGVHGFTLDPLLGDFILTHPSMTVIPESGEFAINSSNSRFWEPPIRAYVD ELLAGRSGPRSKDYNMRWIAALVADVHRILLRGGIYLYPRDTKTPDLAGRLRLLYEAAPVAFLMEQAGGRCTTGTRTMLD LVPGSLHERVPLIFGSAVEVERVETLYREPQRREFATPLFNQRGLFRD
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI22907028, Length=342, Percent_Identity=38.8888888888889, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI189083692, Length=335, Percent_Identity=38.5074626865672, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI16579888, Length=335, Percent_Identity=38.5074626865672, Blast_Score=226, Evalue=3e-59, Organism=Escherichia coli, GI1790679, Length=331, Percent_Identity=42.5981873111783, Blast_Score=241, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17508131, Length=329, Percent_Identity=40.4255319148936, Blast_Score=253, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6323409, Length=340, Percent_Identity=38.5294117647059, Blast_Score=236, Evalue=4e-63, Organism=Drosophila melanogaster, GI45550998, Length=335, Percent_Identity=40.5970149253731, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI19921562, Length=335, Percent_Identity=40.5970149253731, Blast_Score=239, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 - InterPro: IPR020548 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 40408; Mature: 40276
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00124 FBPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLSQDRPRERPPMLATDRTTLAQFLVEECRGRAGDDSELLGLLLDVAQACKTISKMTA CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MGSLAGVHGYNGDVNPQGENQARLDLMSNQAFVRATERTGHAAGLASEEMEEVLGFPESY HHHHHCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHH ARGTLLLVFDPLDGSSNIDINGTVGSIFSILPMPRPGEAPQTADFLQSGRQQVAAGYALY CCCEEEEEEECCCCCCCEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE GPSTMFVLTIGSGVHGFTLDPLLGDFILTHPSMTVIPESGEFAINSSNSRFWEPPIRAYV CCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCHHHHHH DELLAGRSGPRSKDYNMRWIAALVADVHRILLRGGIYLYPRDTKTPDLAGRLRLLYEAAP HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH VAFLMEQAGGRCTTGTRTMLDLVPGSLHERVPLIFGSAVEVERVETLYREPQRREFATPL HHHHHHHCCCCCCCCCHHHHHHCCCCHHHCCCEEECCCHHHHHHHHHHHCHHHHHHHCCH FNQRGLFRD HCCCCCCCC >Mature Secondary Structure SVLSQDRPRERPPMLATDRTTLAQFLVEECRGRAGDDSELLGLLLDVAQACKTISKMTA CCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MGSLAGVHGYNGDVNPQGENQARLDLMSNQAFVRATERTGHAAGLASEEMEEVLGFPESY HHHHHCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHH ARGTLLLVFDPLDGSSNIDINGTVGSIFSILPMPRPGEAPQTADFLQSGRQQVAAGYALY CCCEEEEEEECCCCCCCEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE GPSTMFVLTIGSGVHGFTLDPLLGDFILTHPSMTVIPESGEFAINSSNSRFWEPPIRAYV CCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCHHHHHH DELLAGRSGPRSKDYNMRWIAALVADVHRILLRGGIYLYPRDTKTPDLAGRLRLLYEAAP HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH VAFLMEQAGGRCTTGTRTMLDLVPGSLHERVPLIFGSAVEVERVETLYREPQRREFATPL HHHHHHHCCCCCCCCCHHHHHHCCCCHHHCCCEEECCCHHHHHHHHHHHCHHHHHHHCCH FNQRGLFRD HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA