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The map label for this gene is yiaB [H]

Identifier: 82545934

GI number: 82545934

Start: 3576544

End: 3576897

Strand: Reverse

Name: yiaB [H]

Synonym: SBO_3571

Alternate gene names: 82545934

Gene position: 3576897-3576544 (Counterclockwise)

Preceding gene: 82545935

Following gene: 82545933

Centisome position: 79.14

GC content: 40.96

Gene sequence:

>354_bases
ATGGAGATCGTTATGAAAACCTCAAAAACTGTGGCAAAACTATTATTTGTTGTCGGGGCGCTGGTTTATCTGGTTGGGCT
ATGGATCTCATGCCCATTGCTAAGTGGAAAAGGCTATTTTCTTGGCGTGTTAATGACAGCAACTTTTGGTAACTATGCAT
ATCTTCGCGCAGAAAAACTCGGGCAACTGGATAATTTTTTTACCCATATCTGCCAGTTAGTTGCGTTAATCACTATCGGT
CTCTTGTTTATCGGTGTTTTAAATGCACCTATCAATGCTTATGAAATGGTGATCTACCCCATCGCCTTTTTTGTCTGCTT
GTTTGGTCAAATGCGTTTGTTTCGCTCGGTATGA

Upstream 100 bases:

>100_bases
CTAATTAATATTTAGTATGAATTTATTCTGAAAATCATTTGTTAATGGCATTTTTCAGTTTTGTCTTTCGTTGGTTACTC
GTAATGTATCGCTGGTAGAT

Downstream 100 bases:

>100_bases
GCAACATAAAGCTCTTACACATTCAGGAATGAAAGGAATACTGTGATGGACAACAAAATATCAACCTATTCACCGGCCTT
TAGTATTGTGTCATGGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MEIVMKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDNFFTHICQLVALITIG
LLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV

Sequences:

>Translated_117_residues
MEIVMKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDNFFTHICQLVALITIG
LLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV
>Mature_117_residues
MEIVMKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDNFFTHICQLVALITIG
LLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082293, Length=112, Percent_Identity=98.2142857142857, Blast_Score=222, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 13025; Mature: 13025

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVMKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHCCHHHHHHHHH
GQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIVMKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHCCHHHHHHHHH
GQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]