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The map label for this gene is yiaA [H]

Identifier: 82545933

GI number: 82545933

Start: 3576061

End: 3576501

Strand: Reverse

Name: yiaA [H]

Synonym: SBO_3570

Alternate gene names: 82545933

Gene position: 3576501-3576061 (Counterclockwise)

Preceding gene: 82545934

Following gene: 82545929

Centisome position: 79.13

GC content: 41.72

Gene sequence:

>441_bases
GTGATGGACAACAAAATATCAACCTATTCACCGGCCTTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTAC
CTATCTGTTAGGGCTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGGTATTATTTTGCCGTACTGGTGTTAGGACTGT
TTTCTGCTGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACTTCCATTTATTATATGACCTGC
CTGACTGTCTTTATTATCTCTGTTGCATTACTGATGGTAGGTCTGTGGAATGCGACATTATTACTCAGTGAAAAAGGTTT
TTATGGACTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAGAATATTCGTGATGCCGGAATAAACCCGC
CAAAAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA

Upstream 100 bases:

>100_bases
CCCCATCGCCTTTTTTGTCTGCTTGTTTGGTCAAATGCGTTTGTTTCGCTCGGTATGAGCAACATAAAGCTCTTACACAT
TCAGGAATGAAAGGAATACT

Downstream 100 bases:

>100_bases
TTCACGTAAGCCCGGTCAGTCCAATGTGAACGGGCTTTTACTTAACTCACTAATCTGTTTCTGTCGATTCGTTGTACCAG
CATAGAAAGTAACAAACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MMDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTC
LTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE

Sequences:

>Translated_146_residues
MMDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTC
LTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE
>Mature_146_residues
MMDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTC
LTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=145, Percent_Identity=100, Blast_Score=294, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 16254; Mature: 16254

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHH
KTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH
AVQKNIRDAGINPPKETQVTQEEYSE
HHHHHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MMDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHH
KTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH
AVQKNIRDAGINPPKETQVTQEEYSE
HHHHHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]