Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is eutL [H]
Identifier: 82544898
GI number: 82544898
Start: 2454054
End: 2454713
Strand: Reverse
Name: eutL [H]
Synonym: SBO_2464
Alternate gene names: 82544898
Gene position: 2454713-2454054 (Counterclockwise)
Preceding gene: 82544899
Following gene: 82544897
Centisome position: 54.31
GC content: 55.76
Gene sequence:
>660_bases ATGCCAGCTTTAGATTTGATTCGACCGTCGGTAACCGCCATGCGGGTGATTGCCTCCGTTAACGCTGAATTTGCGCGTGA ACTAAAATTGCCGCCGCATATTCGTAGCCTCGGGCTGATTTCTGCTGATTCCGATGACGTCACCTACATTGCGGCTGACG AAGCGACCAAGCAGGCGATGGTCGAAGTGGTATATGGCCGCTCGCTGTATGCGGGAGCAGCACACGGACCGTCACCGACT GCCGGTGAAGTGCTGATTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCTGGTCTGGATGCGATGGTTGCGCATAT TGAAAATGGCGCTGCTTTCCAGTGGGCTAATGACGCAGAAAACACCGCATTCCTGGCACATGTAGTTTCGCGTACCGGTT CTTATCTCTCATCAACCGCCGGGATCACGCTTGGCGATCCGATGGCGTATCTGGTGGCACCGCCGCTGGAAGCGACCTAC GGCATTGATGCAGCGTTGAAATCTGCCGACGTACAGCTGGTGACCTATGTCCCGCCACCGTCTGAAACCAACTACTCGGC AGCATTTTTAACCGGTAGCCAGGCCGCGTGTAAAGCAGCCTGTAACGCCTTTACCGATGCAGTGCTGGAAATCGCGCGTA ATCCAATCCAGCGTGCGTAA
Upstream 100 bases:
>100_bases CACGCCGCCGGTTGAAGCCGCAGCCGTCATTGTGGATTTGGCGAAACGTATGCTGGAGCAGAAAGCATCCGGCATCAACA TGACCCGATAAGGAGGCATC
Downstream 100 bases:
>100_bases CGGAGGTTGCCGATGATCAATGCACTGGGATTGCTGGAAGTGGACGGCATGGTCGCCGCGATAGATGCAGCGGATGCCAT GCTCAAAGCAGCTAACGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPT AGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
Sequences:
>Translated_219_residues MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPT AGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA >Mature_218_residues PALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTA GEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYG IDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
Specific function: May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place [H]
COG id: COG4816
COG function: function code E; Ethanolamine utilization protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EutL/PduB family [H]
Homologues:
Organism=Escherichia coli, GI1788780, Length=219, Percent_Identity=97.7168949771689, Blast_Score=436, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009193 - InterPro: IPR000249 [H]
Pfam domain/function: PF00936 BMC [H]
EC number: NA
Molecular weight: Translated: 22816; Mature: 22685
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM CCCHHHHCCHHHHHHHHHHHCHHHHHHCCCCCCHHHCEEEECCCCCEEEEECCHHHHHHH VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAE HHHHHCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC NTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP CHHHHHHHHHHCCHHHHHCCCEEECCCCEEEECCCCCHHCCHHHHHCCCCEEEEEECCCC SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM CCHHHHCCHHHHHHHHHHHCHHHHHHCCCCCCHHHCEEEECCCCCEEEEECCHHHHHHH VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAE HHHHHCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC NTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP CHHHHHHHHHHCCHHHHHCCCEEECCCCEEEECCCCCHHCCHHHHHCCCCEEEEEECCCC SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]