Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is eutC [H]
Identifier: 82544899
GI number: 82544899
Start: 2454723
End: 2455499
Strand: Reverse
Name: eutC [H]
Synonym: SBO_2465
Alternate gene names: 82544899
Gene position: 2455499-2454723 (Counterclockwise)
Preceding gene: 82544900
Following gene: 82544898
Centisome position: 54.33
GC content: 57.14
Gene sequence:
>777_bases GTGACCTCGGAAAGCTGCGCGCTGGATTTAGGTTCTGCGGAAGCAAAAGCGTGGATTGGTGTTGAAAACCCGCATCGCGC AGACGTATTAACAGAACTGCGTCGCAGCACCGTGGCCCGCGTTTGTACCGGTCGTGCCGGTCCGCGTCCGCGTACCCAGG CGTTGCTGCGTTTCCTGGCCGATCACTCTCGTTCGAAAGATACCGTACTGAAAGAAGTGCCGGAAGAGTGGGTGAAAGCG CAGGGCTTGCTGGAAGTACGCTCCGAAATTAGCGACAAAAATCTCTACCTGACTCGCCCGGATATGGGCCGCCGCCTGTG TGCAGAAGCTGTTGAAGCGCTGAAAGCACAGTGTGTTGCTAATCCGGACGTACAGGTCGTTATTTCTGATGGCCTGTCAA CTGATGCCATCACCGTGAACTACGAAGAGATCCTGCCGCCGCTGATGGCGGGCCTGAAACAGGCCGGGCTGAAAGTCGGC ACGCCATTCTTTGTTCGTTATGGTCGCGTGAAGATTGAAGATCAGATCGGTGAGATCCTCGGCGCGAAAGTGGTGATCCT GCTGGTGGGGGAACGTCCGGGGTTGGGTCAGTCAGAAAGCCTCTCCTGTTACGCCGTTTACTCGCCGCGTATGGCGACCA CCGTTGAGGCCGATCGCACCTGCATCTCTAACATTCACCAGGGCGGCACGCCGCCGGTTGAAGCCGCAGCCGTCATTGTG GATTTGGCGAAACGTATGCTGGAGCAGAAAGCATCCGGCATCAACATGACCCGATAA
Upstream 100 bases:
>100_bases TCTGAACATAAAACACTGTCAGTAAGTTGGAGTCATTACCGGACAAACGGCCCCCGCGCTGTCAGAAGCAAAGTGCACCA CCACCACCTGTGCGGCACCG
Downstream 100 bases:
>100_bases GGAGGCATCATGCCAGCTTTAGATTTGATTCGACCGTCGGTAACCGCCATGCGGGTGATTGCCTCCGTTAACGCTGAATT TGCGCGTGAACTAAAATTGC
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKA QGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVG TPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIV DLAKRMLEQKASGINMTR
Sequences:
>Translated_258_residues MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKA QGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVG TPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIV DLAKRMLEQKASGINMTR >Mature_257_residues TSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQ GLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGT PFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVD LAKRMLEQKASGINMTR
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=258, Percent_Identity=99.6124031007752, Blast_Score=526, Evalue=1e-151,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 27996; Mature: 27864
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLA CCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCC NPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEIL CCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHEEECCEEEHHHHHHHH GAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIV CCEEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DLAKRMLEQKASGINMTR HHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLA CCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCC NPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEIL CCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHEEECCEEEHHHHHHHH GAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIV CCEEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DLAKRMLEQKASGINMTR HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA