Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is eutK [H]
Identifier: 82544897
GI number: 82544897
Start: 2453541
End: 2454047
Strand: Reverse
Name: eutK [H]
Synonym: SBO_2463
Alternate gene names: 82544897
Gene position: 2454047-2453541 (Counterclockwise)
Preceding gene: 82544898
Following gene: 82544896
Centisome position: 54.3
GC content: 58.38
Gene sequence:
>507_bases TTGCCGATGATCAATGCACTGGGATTGCTGGAAGTGGACGGCATGGTCGCCGCGATAGATGCAGCGGATGCCATGCTCAA AGCAGCTAACGTTCGTCTGCTCAGTCACGAAGTGCTTGACCCTGGTCGCTTAACGCTGGTGGTGGAAGGCGATCTGGCGG CGGGTCGTGCGGCGCTGGACGCAGGTTGTGCTGCCGCGATGCGTACCGGGCGTGTCATCAGCCGCAAGGAGATCGGTCGG CCAGACGATGACACCCAGTGGCTGGTTACTGGCTTTAACCGCCAGCCGAAGCAACCCGTAAGGGAACCCGACGCGCCAGT TATCGTCGCGGAATCTGCTGACGAGTTGTTGGCGCTGTTAACATCAGTACGTCAGGGAATGACGGCAGGAGAAGTGGCTG CCCACTTTGGCTGGCCGCTGGAAAAAGCCAGAAATGCGCTCGAACAGCTCTTTTCTGCCGGGACGTTACGTAAACGCAGT AGTCGTTATCGTCTCAAGCCCCATTAA
Upstream 100 bases:
>100_bases TTTAACCGGTAGCCAGGCCGCGTGTAAAGCAGCCTGTAACGCCTTTACCGATGCAGTGCTGGAAATCGCGCGTAATCCAA TCCAGCGTGCGTAACGGAGG
Downstream 100 bases:
>100_bases CCTGTCGGAGGTGCTGGGTGTCCTACAACACCCGGCATTAACATCATGAAAAAGACCCGTACAGCCAATTTGCACCATCT TTATCATGAACCCTTACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPMINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGR PDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRS SRYRLKPH
Sequences:
>Translated_168_residues MPMINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGR PDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRS SRYRLKPH >Mature_167_residues PMINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGRP DDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSS RYRLKPH
Specific function: May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place [H]
COG id: COG4577
COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial microcompartments protein family [H]
Homologues:
Organism=Escherichia coli, GI87082105, Length=166, Percent_Identity=99.3975903614458, Blast_Score=330, Evalue=3e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020808 - InterPro: IPR000249 - InterPro: IPR011991 [H]
Pfam domain/function: PF00936 BMC [H]
EC number: NA
Molecular weight: Translated: 18075; Mature: 17944
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS01139 BACT_MICROCOMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAAGRAALD CCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH AGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALL HHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHH TSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCC >Mature Secondary Structure PMINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAAGRAALD CCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH AGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALL HHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHH TSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]