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The map label for this gene is 78778923

Identifier: 78778923

GI number: 78778923

Start: 503440

End: 504663

Strand: Direct

Name: 78778923

Synonym: PMT9312_0538

Alternate gene names: NA

Gene position: 503440-504663 (Clockwise)

Preceding gene: 78778921

Following gene: 78778925

Centisome position: 29.45

GC content: 27.29

Gene sequence:

>1224_bases
TTGAGAAGTTGGCAAATTTTTAAAATATGGGGAATTCCCTTCAGAATTCATCCTTATTGGTTTGCAATTCTCTTTTTATT
CTCATGGAGTATTAGTAATCAGGTTAATTTTACCTCAGGCGATATTTACAATACTAAAGAGGCTTGGATTATTGGATTTT
CTACATCTTTTTTATTATTATCTTCAATTATTTCTCATGAGGTTTTACATACCTTTGTTTCCCTAAATCAGGGTGTAAAA
ATTAGAAAAATCACTTTTTATTTTCTAGGGGCAATTTTACACACAGATAAGTATTGTCAAACTGCTTTGGGGAATATAAA
AATTGCAATCGTTAGACCTCTATTATGTTTCGCTACAGCATTTATTCTACTTTTAATTAGCAATTACAGTACATCTCAAG
AAATAATAGCTATCAATATAATTTCTAGAGTAGGTATATTAAATTTATTCTTAGGCTTCTTAAATTTAATTCCAATTGGT
TCTTTAGATGGGGGGAATTTATTAAAAAGTATTATTTGGCATTTCTCAGGGAGTAAAAATAAAGGAAGAGATTTCCTCAA
TAAAGTAAATTTATCTTTATCTTTTTTAGTTCTAATATTTGGCATAATTTGTTTATTTAGATTTAATTTTTATTATGGTT
TTATTCTTTCTTTTTTAGGTTTGTTAGGCGTTAATTCTTCAAAATCAGAAAGTCAATTTTTTAAAATTGAAAACATCCTT
AAATTTAGTAAAGTTTCTGAGCTTAAATTAAAGCCATTGAGAAAAATTGAATTCGATTCTAATTTCTCAGAATTTAACAC
AAAAATAAAAGATAAAAAGGATGCAGCAGATAAATATTTCTTTGTTGCAAATACTGGTAGATGGACCGGTTTTGTTGATG
AGAATATTTTAAAAACTGTAACTATAAAAAAATGGGAGCGGAATTTTGTTGGGGATTTTCAGAAACCAATAAACAGTTTT
GCGAATATCTATAGTAATGAAAAATTATGGAAAACTATAGAAAGACTTGAAGACACTAGTGAAGGTTTTTTATTGGTACT
CAATGCTGCAGATATCCCTTTGGGGATAATTGATAGGTCTAAAATTGGATACTTTATATTGAATAAATTAGGTTTTAATT
TGCCTTTAGAGATTGTTAACAAATTAAATTATAAAAATCAGTATCCTTTGGGAATTGAATTGCCAAGAATAGTTAATTTA
ATGAAGCAGAAAGGAGATCTTTAA

Upstream 100 bases:

>100_bases
AGACGTGAGTCCGCAAATTTTAACTAAAGTGTTAGTCTTGGGCATATCGTTATCCAGTATGTAAAATTAATATTATTGCT
AAATATAGCGGAGATTATTT

Downstream 100 bases:

>100_bases
GAATTGGTGTCATGAAAATTTTCAATATTTTAATTATCAATGGCAACATTTTTGAATCTTATATTAGATTTATTCTCTAG
GAATGAATTTCTTAAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRSWQIFKIWGIPFRIHPYWFAILFLFSWSISNQVNFTSGDIYNTKEAWIIGFSTSFLLLSSIISHEVLHTFVSLNQGVK
IRKITFYFLGAILHTDKYCQTALGNIKIAIVRPLLCFATAFILLLISNYSTSQEIIAINIISRVGILNLFLGFLNLIPIG
SLDGGNLLKSIIWHFSGSKNKGRDFLNKVNLSLSFLVLIFGIICLFRFNFYYGFILSFLGLLGVNSSKSESQFFKIENIL
KFSKVSELKLKPLRKIEFDSNFSEFNTKIKDKKDAADKYFFVANTGRWTGFVDENILKTVTIKKWERNFVGDFQKPINSF
ANIYSNEKLWKTIERLEDTSEGFLLVLNAADIPLGIIDRSKIGYFILNKLGFNLPLEIVNKLNYKNQYPLGIELPRIVNL
MKQKGDL

Sequences:

>Translated_407_residues
MRSWQIFKIWGIPFRIHPYWFAILFLFSWSISNQVNFTSGDIYNTKEAWIIGFSTSFLLLSSIISHEVLHTFVSLNQGVK
IRKITFYFLGAILHTDKYCQTALGNIKIAIVRPLLCFATAFILLLISNYSTSQEIIAINIISRVGILNLFLGFLNLIPIG
SLDGGNLLKSIIWHFSGSKNKGRDFLNKVNLSLSFLVLIFGIICLFRFNFYYGFILSFLGLLGVNSSKSESQFFKIENIL
KFSKVSELKLKPLRKIEFDSNFSEFNTKIKDKKDAADKYFFVANTGRWTGFVDENILKTVTIKKWERNFVGDFQKPINSF
ANIYSNEKLWKTIERLEDTSEGFLLVLNAADIPLGIIDRSKIGYFILNKLGFNLPLEIVNKLNYKNQYPLGIELPRIVNL
MKQKGDL
>Mature_407_residues
MRSWQIFKIWGIPFRIHPYWFAILFLFSWSISNQVNFTSGDIYNTKEAWIIGFSTSFLLLSSIISHEVLHTFVSLNQGVK
IRKITFYFLGAILHTDKYCQTALGNIKIAIVRPLLCFATAFILLLISNYSTSQEIIAINIISRVGILNLFLGFLNLIPIG
SLDGGNLLKSIIWHFSGSKNKGRDFLNKVNLSLSFLVLIFGIICLFRFNFYYGFILSFLGLLGVNSSKSESQFFKIENIL
KFSKVSELKLKPLRKIEFDSNFSEFNTKIKDKKDAADKYFFVANTGRWTGFVDENILKTVTIKKWERNFVGDFQKPINSF
ANIYSNEKLWKTIERLEDTSEGFLLVLNAADIPLGIIDRSKIGYFILNKLGFNLPLEIVNKLNYKNQYPLGIELPRIVNL
MKQKGDL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 46774; Mature: 46774

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSWQIFKIWGIPFRIHPYWFAILFLFSWSISNQVNFTSGDIYNTKEAWIIGFSTSFLLL
CCCCEEEEEECCCEEECHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEECHHHHHH
SSIISHEVLHTFVSLNQGVKIRKITFYFLGAILHTDKYCQTALGNIKIAIVRPLLCFATA
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH
FILLLISNYSTSQEIIAINIISRVGILNLFLGFLNLIPIGSLDGGNLLKSIIWHFSGSKN
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
KGRDFLNKVNLSLSFLVLIFGIICLFRFNFYYGFILSFLGLLGVNSSKSESQFFKIENIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KFSKVSELKLKPLRKIEFDSNFSEFNTKIKDKKDAADKYFFVANTGRWTGFVDENILKTV
HHHHHHHHHCCCCCEEECCCCHHHHCCHHCCCCCCCCCEEEEEECCCEECCCCCHHHHHH
TIKKWERNFVGDFQKPINSFANIYSNEKLWKTIERLEDTSEGFLLVLNAADIPLGIIDRS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCC
KIGYFILNKLGFNLPLEIVNKLNYKNQYPLGIELPRIVNLMKQKGDL
HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSWQIFKIWGIPFRIHPYWFAILFLFSWSISNQVNFTSGDIYNTKEAWIIGFSTSFLLL
CCCCEEEEEECCCEEECHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEECHHHHHH
SSIISHEVLHTFVSLNQGVKIRKITFYFLGAILHTDKYCQTALGNIKIAIVRPLLCFATA
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH
FILLLISNYSTSQEIIAINIISRVGILNLFLGFLNLIPIGSLDGGNLLKSIIWHFSGSKN
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
KGRDFLNKVNLSLSFLVLIFGIICLFRFNFYYGFILSFLGLLGVNSSKSESQFFKIENIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KFSKVSELKLKPLRKIEFDSNFSEFNTKIKDKKDAADKYFFVANTGRWTGFVDENILKTV
HHHHHHHHHCCCCCEEECCCCHHHHCCHHCCCCCCCCCEEEEEECCCEECCCCCHHHHHH
TIKKWERNFVGDFQKPINSFANIYSNEKLWKTIERLEDTSEGFLLVLNAADIPLGIIDRS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCC
KIGYFILNKLGFNLPLEIVNKLNYKNQYPLGIELPRIVNLMKQKGDL
HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]