| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is psaM
Identifier: 78778925
GI number: 78778925
Start: 505518
End: 505622
Strand: Direct
Name: psaM
Synonym: PMT9312_0540
Alternate gene names: 78778925
Gene position: 505518-505622 (Clockwise)
Preceding gene: 78778923
Following gene: 78778926
Centisome position: 29.58
GC content: 33.33
Gene sequence:
>105_bases ATGGAGCCAACTCAAACAATAAATTTAATTGCACTAAGCCTAATAGTAGTTGTGCATGCAGGTGTTTTAGCATTAAGACT AGGTATTAGTTTAGGTAGAAACTAA
Upstream 100 bases:
>100_bases AATTTTTTCTTTCAATTTATTAATTACGTAACATCATTTTGTAATAGTGTGTCAAATTCCCTCTTTTAGGTGGAGAATAA AGGAAATATTTTTTTTACCT
Downstream 100 bases:
>100_bases ATTAATTAGAAAATATAAATTTTTAAGGTAATAATATAACAAGACTGAATTTACCTATTCAGTAAATATACCAAGAAAAA TTTGTCAAAGTCCTTTTATA
Product: photosystem I reaction center subunit XII
Products: NA
Alternate protein names: PSI-M
Number of amino acids: Translated: 34; Mature: 34
Protein sequence:
>34_residues MEPTQTINLIALSLIVVVHAGVLALRLGISLGRN
Sequences:
>Translated_34_residues MEPTQTINLIALSLIVVVHAGVLALRLGISLGRN >Mature_34_residues MEPTQTINLIALSLIVVVHAGVLALRLGISLGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PsaM family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAM_PROM9 (Q31BZ4)
Other databases:
- EMBL: CP000111 - RefSeq: YP_397037.1 - STRING: Q31BZ4 - GeneID: 3765339 - GenomeReviews: CP000111_GR - KEGG: pmi:PMT9312_0540 - HOGENOM: HBG635194 - ProtClustDB: PRK11878 - BioCyc: PMAR74546:PMT9312_0540-MONOMER - GO: GO:0015979 - HAMAP: MF_00828 - InterPro: IPR010010 - TIGRFAMs: TIGR03053
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3583; Mature: 3583
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x111ea7b0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPTQTINLIALSLIVVVHAGVLALRLGISLGRN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure MEPTQTINLIALSLIVVVHAGVLALRLGISLGRN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA