| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is folE [H]
Identifier: 78778921
GI number: 78778921
Start: 501991
End: 502731
Strand: Direct
Name: folE [H]
Synonym: PMT9312_0536
Alternate gene names: 78778921
Gene position: 501991-502731 (Clockwise)
Preceding gene: 78778920
Following gene: 78778923
Centisome position: 29.37
GC content: 33.87
Gene sequence:
>741_bases ATGACCTCTACATTACCCAACGATAATATTAGAAACTTTGATGACCAGATTACTAATAAACTAATCTCTGAAATTATCAG AGACAGAATTAAGAATTCTGGGACAAGATTCAGTGCAAATGATAACATTGCAGACTTTATAAATCCTGGAGAATTAGAAA TTCTAGAAAAAGAAGTAGCCTCCAGAGTTAAAGACCTCCTTAAGTCCTTAGTAATAGATGTTGAAAATGATCATAATACT CAAGAGACTGCAGAAAGAGTCTCAAAGATGTATTTAAATGAAGTTTTTAAAGGGAGATATCATGAACAACCCAAAGTTAC AAGTTTTCCAAACGATAAGAATCTTGATGAGATTTATACTGTAGGCCCTATTTCAGTAAGATCTGCATGTTCACATCATT TGGTCCCAATTCTTGGGGAGTGTTGGATAGGCATTAAACCTGGGAATAAAGTTATAGGGCTCTCAAAATTTGCAAGAGTC GCTGATTGGGTTTTTTCAAGACCTCATATTCAAGAAGAAGCTGTAATGATACTCGCAGATGAAATTGAAAAATTGTGTGA ACCTAAAGGTTTAGGTATTATTGTGAAGGCCCAACACTATTGTATGAAATGGAGGGGAGTTAAAGAACCAAATACAAGTA TGATTAATTCTGTAGTAAGAGGCGACTTTAGGCATGACTTAAGTTTAAAACAAGAATTTTTTGAACTTGTAAAACAGCAA TCTGCAACTAATAACTACTAA
Upstream 100 bases:
>100_bases GAACCCGATTGAACAAGAGAATGTGATATAGTGTATAAGCAATTAAGCTTTTGGAAGATACAGTAAATTAAGTTGCATAC AATTTTCTGTTTAAAATTTT
Downstream 100 bases:
>100_bases TTCTTTTTTAAAAACTTAATTAGGGCCCCTGTTTTTTCTAGATCTTTCAAGCCTGGAGATATTTCAATACTGCTTGAAAT GTCTAGTCCATCTGGTTTGA
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTSTLPNDNIRNFDDQITNKLISEIIRDRIKNSGTRFSANDNIADFINPGELEILEKEVASRVKDLLKSLVIDVENDHNT QETAERVSKMYLNEVFKGRYHEQPKVTSFPNDKNLDEIYTVGPISVRSACSHHLVPILGECWIGIKPGNKVIGLSKFARV ADWVFSRPHIQEEAVMILADEIEKLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMINSVVRGDFRHDLSLKQEFFELVKQQ SATNNY
Sequences:
>Translated_246_residues MTSTLPNDNIRNFDDQITNKLISEIIRDRIKNSGTRFSANDNIADFINPGELEILEKEVASRVKDLLKSLVIDVENDHNT QETAERVSKMYLNEVFKGRYHEQPKVTSFPNDKNLDEIYTVGPISVRSACSHHLVPILGECWIGIKPGNKVIGLSKFARV ADWVFSRPHIQEEAVMILADEIEKLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMINSVVRGDFRHDLSLKQEFFELVKQQ SATNNY >Mature_245_residues TSTLPNDNIRNFDDQITNKLISEIIRDRIKNSGTRFSANDNIADFINPGELEILEKEVASRVKDLLKSLVIDVENDHNTQ ETAERVSKMYLNEVFKGRYHEQPKVTSFPNDKNLDEIYTVGPISVRSACSHHLVPILGECWIGIKPGNKVIGLSKFARVA DWVFSRPHIQEEAVMILADEIEKLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMINSVVRGDFRHDLSLKQEFFELVKQQS ATNNY
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=127, Percent_Identity=37.7952755905512, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4503949, Length=127, Percent_Identity=37.7952755905512, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI66932970, Length=86, Percent_Identity=38.3720930232558, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI66932972, Length=86, Percent_Identity=38.3720930232558, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1788476, Length=184, Percent_Identity=29.8913043478261, Blast_Score=109, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=33.1460674157303, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321706, Length=188, Percent_Identity=31.3829787234043, Blast_Score=96, Evalue=6e-21, Organism=Drosophila melanogaster, GI24656782, Length=126, Percent_Identity=37.3015873015873, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656796, Length=126, Percent_Identity=37.3015873015873, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656791, Length=126, Percent_Identity=37.3015873015873, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 28085; Mature: 27954
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTLPNDNIRNFDDQITNKLISEIIRDRIKNSGTRFSANDNIADFINPGELEILEKEVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHCCCCHHHHHHHHHH SRVKDLLKSLVIDVENDHNTQETAERVSKMYLNEVFKGRYHEQPKVTSFPNDKNLDEIYT HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEE VGPISVRSACSHHLVPILGECWIGIKPGNKVIGLSKFARVADWVFSRPHIQEEAVMILAD CCCHHHHHHHHHHHHHHHHCCEEEECCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHH EIEKLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMINSVVRGDFRHDLSLKQEFFELVKQQ HHHHHCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATNNY HCCCCC >Mature Secondary Structure TSTLPNDNIRNFDDQITNKLISEIIRDRIKNSGTRFSANDNIADFINPGELEILEKEVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHCCCCHHHHHHHHHH SRVKDLLKSLVIDVENDHNTQETAERVSKMYLNEVFKGRYHEQPKVTSFPNDKNLDEIYT HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEE VGPISVRSACSHHLVPILGECWIGIKPGNKVIGLSKFARVADWVFSRPHIQEEAVMILAD CCCHHHHHHHHHHHHHHHHCCEEEECCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHH EIEKLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMINSVVRGDFRHDLSLKQEFFELVKQQ HHHHHCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATNNY HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA