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The map label for this gene is fixC [C]

Identifier: 78778905

GI number: 78778905

Start: 486352

End: 487485

Strand: Reverse

Name: fixC [C]

Synonym: PMT9312_0520

Alternate gene names: 78778905

Gene position: 487485-486352 (Counterclockwise)

Preceding gene: 78778906

Following gene: 78778900

Centisome position: 28.52

GC content: 33.77

Gene sequence:

>1134_bases
TTGAAAGAATTTGATGTCGTAATAATTGGTGGAGGTTTATCAGGATCTTCTTCCGCTCTTAACCTATCAAAAAAAGGATA
TTCTGTTCTAGTTATTGAAAAAGAAAATTGCCAAGATTACAAACCATGTGCCGGAGGAATGGCGTCTTCAATGCAAAAAT
TTCTACCTTTAGACATAAAAGATTCCATAGAGTCAAAAATTAAGAATGTTGAATTCAGATGGAAGGCTTCTGATAATGTG
ACCGCTGATCTTACTGGTGAATCGCCTTTTTGGATTATTAAAAGAGAGAAACTTGATCAATTATTACTAGATGAATCCTT
GAGGAATGGAGTTCAAATAATAAGGCCAGTATTAGTAGAAAAAATCATAAAAAAAAATGATAAATGGGAAATTACGTGCA
ATAACAAAAGAAAATATATATCTGAATTTCTTGTTGTTGCAGACGGATCTCAATCCAAATGGGCAGGATATTTCAAATTG
GGGCCAAGAAAACCTAAATTTGCAAACACAATCTCACTAAGATTGAAAGGTTTAGGTGCAATTCCTAGAGATGCAGTTAG
GTTTGAGTTTGGATTTATAAAATATGGATTTGCATGGGCATTCCCCCTAAAAGAGAGCTTAAATATTGGTTTAGGTACTT
TTATAAATAACGGTCTTCTAGAAAATCAGACTATAAATAATCAAGTTATTAGAAGCTTCGGATTTGATGATTTGTCTTAC
AAAACAATTAATAAGAAATTGAGAATATGGAATGGCCTCCACCCAATAAATAATGATAAAGTTTTAGCGGTTGGAGATGC
AGCCTCTCTATGCGATCCATTTTTAGCTGAAGGAATTAGACCTTCTTTAATTAGCAGTTTTTATGCTGCAGAATGCATAG
ATCAATGCCTAACTGGGAAAGTACATGATTTAAATCTTTACACAACAGAAATTAACAACAATTGGGGGAGATCAATGGCT
TGGGGGAGAAGGATTGCGCAGGTCTTTTATAGATTTCCGAGAACAGGATATCAATTAGGTGTCAAAAGAAAAACAGCACC
TAAACGTATTGCCCAAATATTATCAGGGGAAATGAATTATGAAGACATAGCAAAAAGAGTTATAAAAAGGCTTTTAACAA
AGAGTGGGATTTAG

Upstream 100 bases:

>100_bases
AATCAAGAGATAATCAATCTGAAATTCAGAAAATTACCAATAAATTTATTGCCTTAATAGAAACTAAATTATCCGAAAAA
GAGAAGGAAATTCTAAAAGT

Downstream 100 bases:

>100_bases
TTTTTTTAATTAAAACTTAAATTTAGTTGGCAGAAATTAATTTATGATTTTTCATTTCTGATAATCTCTCTATTAGGAGT
TCTTCTAATTCTTCTATAGC

Product: NAD binding site

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKEFDVVIIGGGLSGSSSALNLSKKGYSVLVIEKENCQDYKPCAGGMASSMQKFLPLDIKDSIESKIKNVEFRWKASDNV
TADLTGESPFWIIKREKLDQLLLDESLRNGVQIIRPVLVEKIIKKNDKWEITCNNKRKYISEFLVVADGSQSKWAGYFKL
GPRKPKFANTISLRLKGLGAIPRDAVRFEFGFIKYGFAWAFPLKESLNIGLGTFINNGLLENQTINNQVIRSFGFDDLSY
KTINKKLRIWNGLHPINNDKVLAVGDAASLCDPFLAEGIRPSLISSFYAAECIDQCLTGKVHDLNLYTTEINNNWGRSMA
WGRRIAQVFYRFPRTGYQLGVKRKTAPKRIAQILSGEMNYEDIAKRVIKRLLTKSGI

Sequences:

>Translated_377_residues
MKEFDVVIIGGGLSGSSSALNLSKKGYSVLVIEKENCQDYKPCAGGMASSMQKFLPLDIKDSIESKIKNVEFRWKASDNV
TADLTGESPFWIIKREKLDQLLLDESLRNGVQIIRPVLVEKIIKKNDKWEITCNNKRKYISEFLVVADGSQSKWAGYFKL
GPRKPKFANTISLRLKGLGAIPRDAVRFEFGFIKYGFAWAFPLKESLNIGLGTFINNGLLENQTINNQVIRSFGFDDLSY
KTINKKLRIWNGLHPINNDKVLAVGDAASLCDPFLAEGIRPSLISSFYAAECIDQCLTGKVHDLNLYTTEINNNWGRSMA
WGRRIAQVFYRFPRTGYQLGVKRKTAPKRIAQILSGEMNYEDIAKRVIKRLLTKSGI
>Mature_377_residues
MKEFDVVIIGGGLSGSSSALNLSKKGYSVLVIEKENCQDYKPCAGGMASSMQKFLPLDIKDSIESKIKNVEFRWKASDNV
TADLTGESPFWIIKREKLDQLLLDESLRNGVQIIRPVLVEKIIKKNDKWEITCNNKRKYISEFLVVADGSQSKWAGYFKL
GPRKPKFANTISLRLKGLGAIPRDAVRFEFGFIKYGFAWAFPLKESLNIGLGTFINNGLLENQTINNQVIRSFGFDDLSY
KTINKKLRIWNGLHPINNDKVLAVGDAASLCDPFLAEGIRPSLISSFYAAECIDQCLTGKVHDLNLYTTEINNNWGRSMA
WGRRIAQVFYRFPRTGYQLGVKRKTAPKRIAQILSGEMNYEDIAKRVIKRLLTKSGI

Specific function: Probably Accepts Electrons From Fixa/Fixb And Reduces A Quinone. [C]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 42523; Mature: 42523

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFDVVIIGGGLSGSSSALNLSKKGYSVLVIEKENCQDYKPCAGGMASSMQKFLPLDIK
CCCEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHH
DSIESKIKNVEFRWKASDNVTADLTGESPFWIIKREKLDQLLLDESLRNGVQIIRPVLVE
HHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIKKNDKWEITCNNKRKYISEFLVVADGSQSKWAGYFKLGPRKPKFANTISLRLKGLGA
HHHCCCCCEEEEECCHHHHHHHEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCC
IPRDAVRFEFGFIKYGFAWAFPLKESLNIGLGTFINNGLLENQTINNQVIRSFGFDDLSY
CCCHHHEEEECEEEECEEEECCCHHCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCH
KTINKKLRIWNGLHPINNDKVLAVGDAASLCDPFLAEGIRPSLISSFYAAECIDQCLTGK
HHHHHHHHHHCCCCCCCCCCEEEECCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
VHDLNLYTTEINNNWGRSMAWGRRIAQVFYRFPRTGYQLGVKRKTAPKRIAQILSGEMNY
EEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCH
EDIAKRVIKRLLTKSGI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEFDVVIIGGGLSGSSSALNLSKKGYSVLVIEKENCQDYKPCAGGMASSMQKFLPLDIK
CCCEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHH
DSIESKIKNVEFRWKASDNVTADLTGESPFWIIKREKLDQLLLDESLRNGVQIIRPVLVE
HHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIKKNDKWEITCNNKRKYISEFLVVADGSQSKWAGYFKLGPRKPKFANTISLRLKGLGA
HHHCCCCCEEEEECCHHHHHHHEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCC
IPRDAVRFEFGFIKYGFAWAFPLKESLNIGLGTFINNGLLENQTINNQVIRSFGFDDLSY
CCCHHHEEEECEEEECEEEECCCHHCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCH
KTINKKLRIWNGLHPINNDKVLAVGDAASLCDPFLAEGIRPSLISSFYAAECIDQCLTGK
HHHHHHHHHHCCCCCCCCCCEEEECCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
VHDLNLYTTEINNNWGRSMAWGRRIAQVFYRFPRTGYQLGVKRKTAPKRIAQILSGEMNY
EEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCH
EDIAKRVIKRLLTKSGI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]