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The map label for this gene is cpeB [H]

Identifier: 78778692

GI number: 78778692

Start: 294182

End: 294694

Strand: Direct

Name: cpeB [H]

Synonym: PMT9312_0307

Alternate gene names: 78778692

Gene position: 294182-294694 (Clockwise)

Preceding gene: 78778689

Following gene: 78778696

Centisome position: 17.21

GC content: 28.46

Gene sequence:

>513_bases
ATGTCAGTTTCAAAGAAAAATCAACTATTGTCCGCTGATAAGAAATTAAATGATTTAAGCAATATAAAAGAATTTATTAA
TAGTGCAAACTCAAGATTAGATGCAATAACTTCTATAACAAGTAATTCACATGCAATTGCAGCAGACGCTGTAACAGCAA
TGATTTGTGAAAATCAAGACTCAGTTAATTCAAAAATATCTTTAAATACAACTAACAAGATGTCCGTTTGTTTAAGAGAT
GGAGAAATAATTCTAAGGATTGTTGCTTATCTTTTAATTTCTAATGACGAATCAGTTTTAGAAAAAAGTTGTTTAAAGGA
TCTTAAAAATACTTATCTTGCTCTTGGGGTACCTTTAAGAAATGCAAGAAGGGTTGTTGAATTAATGCGAGATGCAACAA
TCTCTGATTTAAATTCAACAGTTAATAATATGCAAGGAAACAAAGGCTTTCTTCCTAAATTAGTATCTGAAACAAAGTTT
CAATTTGAAAGGATAATTAATCTTTTAAACTAG

Upstream 100 bases:

>100_bases
AAGTTATTAATTAAGAAGCGTTGCGTTAAGTTTGAAATTGTATTGTTTTTACTTGCTTTGTATTAATCTTAAGATCGATC
TTTAAATTTTTACTTCAGGA

Downstream 100 bases:

>100_bases
CTAAATTCCTTATCTCTGAAGTATGTGAAGTCTGTATTACTGAGTTATTTTCCAGATTTCTAATAGTAGAAAATCTGGAT
CTTATGTGAGTGGATAAAAA

Product: phycobilisome protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSVSKKNQLLSADKKLNDLSNIKEFINSANSRLDAITSITSNSHAIAADAVTAMICENQDSVNSKISLNTTNKMSVCLRD
GEIILRIVAYLLISNDESVLEKSCLKDLKNTYLALGVPLRNARRVVELMRDATISDLNSTVNNMQGNKGFLPKLVSETKF
QFERIINLLN

Sequences:

>Translated_170_residues
MSVSKKNQLLSADKKLNDLSNIKEFINSANSRLDAITSITSNSHAIAADAVTAMICENQDSVNSKISLNTTNKMSVCLRD
GEIILRIVAYLLISNDESVLEKSCLKDLKNTYLALGVPLRNARRVVELMRDATISDLNSTVNNMQGNKGFLPKLVSETKF
QFERIINLLN
>Mature_169_residues
SVSKKNQLLSADKKLNDLSNIKEFINSANSRLDAITSITSNSHAIAADAVTAMICENQDSVNSKISLNTTNKMSVCLRDG
EIILRIVAYLLISNDESVLEKSCLKDLKNTYLALGVPLRNARRVVELMRDATISDLNSTVNNMQGNKGFLPKLVSETKFQ
FERIINLLN

Specific function: Green-light absorbing phycoerythrin of unknown function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 18820; Mature: 18689

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSKKNQLLSADKKLNDLSNIKEFINSANSRLDAITSITSNSHAIAADAVTAMICENQD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
SVNSKISLNTTNKMSVCLRDGEIILRIVAYLLISNDESVLEKSCLKDLKNTYLALGVPLR
CCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
NARRVVELMRDATISDLNSTVNNMQGNKGFLPKLVSETKFQFERIINLLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SVSKKNQLLSADKKLNDLSNIKEFINSANSRLDAITSITSNSHAIAADAVTAMICENQD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
SVNSKISLNTTNKMSVCLRDGEIILRIVAYLLISNDESVLEKSCLKDLKNTYLALGVPLR
CCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
NARRVVELMRDATISDLNSTVNNMQGNKGFLPKLVSETKFQFERIINLLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]