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The map label for this gene is 78778696

Identifier: 78778696

GI number: 78778696

Start: 296285

End: 296704

Strand: Direct

Name: 78778696

Synonym: PMT9312_0311

Alternate gene names: NA

Gene position: 296285-296704 (Clockwise)

Preceding gene: 78778692

Following gene: 78778707

Centisome position: 17.33

GC content: 29.76

Gene sequence:

>420_bases
ATGATTGATTCTATGAATAAAGTTAATTCAATATTTTTTAGAAATATTATTTATTTACTCCTTTCTATTATCGTTTCGCT
TTGCGTCTCAATAAAAAAATCAGATGCTTTGCCTCATGAATGGGTTGGCGTCCCTAAAAGTGAATATGGAGAACAGCTAT
GGGATAGGCAAAGTATAAAAAGGAATGAAGACGGTTCTGTGAGAGTATTAAGTAAATTTATTCCCAAAACAAAAAGTGAA
ATTACAAAGGATATTCTCTATACAATGGATATAAATTGTTTTGAAAAATCATTTAGAGATGTTGATGTCTCCATAGATGA
AGTAAATACTAATTTTAATGATTTAGCTGATTGGCAAGATCCAAATGGAGATAAACTGATTTTGAGTGTGATTGGTCAAG
TTTGTAGAGTTGAAAACTAA

Upstream 100 bases:

>100_bases
GATTCTATCTATAATAGAAATACTAATCAATAAAAATTTTTACAAATTTTTAATCTTATATTTCCTACCAATAAAAGATT
TTTGTATTCCATCAGAAGTC

Downstream 100 bases:

>100_bases
AAATTTTGGATCAAAGAAATGAAAAGAAATTTATATTTTTCCATACCTAGAAAGTAAAAAGACTTTCATCGTGGGGGTTT
AAAGTTGCCCGGACTCAGAA

Product: pollen allergen-like

Products: NA

Alternate protein names: Pollen Allergen-Like

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIDSMNKVNSIFFRNIIYLLLSIIVSLCVSIKKSDALPHEWVGVPKSEYGEQLWDRQSIKRNEDGSVRVLSKFIPKTKSE
ITKDILYTMDINCFEKSFRDVDVSIDEVNTNFNDLADWQDPNGDKLILSVIGQVCRVEN

Sequences:

>Translated_139_residues
MIDSMNKVNSIFFRNIIYLLLSIIVSLCVSIKKSDALPHEWVGVPKSEYGEQLWDRQSIKRNEDGSVRVLSKFIPKTKSE
ITKDILYTMDINCFEKSFRDVDVSIDEVNTNFNDLADWQDPNGDKLILSVIGQVCRVEN
>Mature_139_residues
MIDSMNKVNSIFFRNIIYLLLSIIVSLCVSIKKSDALPHEWVGVPKSEYGEQLWDRQSIKRNEDGSVRVLSKFIPKTKSE
ITKDILYTMDINCFEKSFRDVDVSIDEVNTNFNDLADWQDPNGDKLILSVIGQVCRVEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15989; Mature: 15989

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSMNKVNSIFFRNIIYLLLSIIVSLCVSIKKSDALPHEWVGVPKSEYGEQLWDRQSIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHC
RNEDGSVRVLSKFIPKTKSEITKDILYTMDINCFEKSFRDVDVSIDEVNTNFNDLADWQD
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHCCCCHHHHCCCCC
PNGDKLILSVIGQVCRVEN
CCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MIDSMNKVNSIFFRNIIYLLLSIIVSLCVSIKKSDALPHEWVGVPKSEYGEQLWDRQSIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHC
RNEDGSVRVLSKFIPKTKSEITKDILYTMDINCFEKSFRDVDVSIDEVNTNFNDLADWQD
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHCCCCHHHHCCCCC
PNGDKLILSVIGQVCRVEN
CCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA