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The map label for this gene is selD [H]

Identifier: 78778689

GI number: 78778689

Start: 287941

End: 290112

Strand: Direct

Name: selD [H]

Synonym: PMT9312_0304

Alternate gene names: 78778689

Gene position: 287941-290112 (Clockwise)

Preceding gene: 78778687

Following gene: 78778692

Centisome position: 16.85

GC content: 29.93

Gene sequence:

>2172_bases
ATGACTTTTAATCATCTGGTACTAATTGGAGGAGGACACTCAAATGTTTCTTTATTAAAGAAATGGTTAATGTTTCCGAA
ATTAATGCCAGAAATTCCTGTTTCAATTATATCTAGAGATTCTCATTTGGTTTATTCGGCGATATTCCCATCGGTAATTT
CAAAATCAATCACTATAGAAGAGAGTTTAATTGATATAAAATCTTTAGCAAAAAATGCAAAAGTATCTTTTATAGAAGAA
GAAGTAAAGGATATTGATTTCAATTTAAAGAAAATTGTTTTAGGTAATAGACCTTCAGTTAATTATTCGAAGTTGGTTCT
TAATTATGGAAGTCAAACAATAATTCCAAAAGAATTTGAATCACTAGTTAAAAATCGAAATGCTTTTTCAATTAAACCTT
TTTTAAGGGCTTATGACTCAATACTAAAAGAGGACATTTTTGATTCAGTTAATGAACTTCCATTTGTAATTGTTGGGAGT
GGCCTTGCTGCAATTGAAGTATCATATGCTTTGAGAAAAAGATGGGGAGATAGACCTTTAAAACTATTATGTGATTCAAG
AAAAATTAATAATACAATTCTAAAAAGTTTACGGAATTCCAATATTGATTTAGTTGAAAAACTTAATTTTGATTATGGCA
AGATTCTTTTATGTACTGGAAATACATCTCCTTTATGGGCAAACAAAAAATTATTAGATTCGGATTCTCATGGCAGAATA
ATCACAAATCAGAATTTGCAGATAAAAAGTTTCTCTGGAATCTTTGCAGTCGGTGATTGTGCAGTTGTAGGTTCAGCAAA
AAGACCAGCATCGGGAGTTTTTGCAGTAAAAGTTGTAAATACATTAGTCCAAAATCTAAAAAAAGATATAGAAGGGAGAT
CATTAAAAAAGTGGTTTCCTCAAAAGATCGGATTGCAAATAGTAAATATATTTCCAAGCCATCATCCAAAGGCATTTGCT
ATTTATCGCAATTTTGTTTTCGGCCCTTCTTTTCTTTTTTGGATTTTAAAGTATAAGATTGATCTCAACTTTATTAAAAA
GTTCAGATCAAAAAGGCTAATTATGAAAAGTAGTGAAAAAAATATTTCATTGAATGATTGCAGAGGATGTGCAGCTAAAA
TTCCTCAGTTTGTTTTGAATAAATCATTAATAAATTCTAATTTAAGTTCTTTTGCCTCATCACCTGAAGATTCAGTTGAG
ATATATCAAAATGGTCAAGATATTATCTTGCAAAGTGTAGATGGATTTCCTGCTTTGGTAAGTGATCCATGGCTTAATGC
AAAAATTACTACTTTGCATGCTTGCTCAGATTTGTGGGCATGCGGAGCAAAACTTGCATCCGCGCAGGCTTTAATTTCAT
TACCAAAAGTTGAAAGGGAATTTCAGAGTTACCTCTTTTCTCAATCACTTCAAGGTATTAAATCAACAGTTGAGGATCAT
GGAGGTGAATTACTTGGAGGCCATACTTTCGAGGCAAGAAGTTTAGTAAATAAACCTTATTCATTAGGAATAGATATTTC
TTTAACAGTTCAAGGTATTTTAAAAAATGGAGCAAAACCATGGCTTAAATCTGGAATGAATATTGGAGATATTCTCATGA
TGTCTAGACCCCTGGGCGTTGGGATTTACTTTGCCGGTCAAATGCAAAATATTAATATGCTAGGTAGTTCTTCTGAAATA
ATTAATAATTTATTAAAGAGTCAGCAATATTTGATTGATGAAATTTATCTTTTTCAAAATCAATTTAAAGAATCATTAGT
CAATGCTGCGACTGACATTACTGGATATGGATTTATTGGACATCTTAAAGAAATGGTTGAATCATCTAATTTATATAGGC
AAAACAATCATCTTGAGCCACTAAAAGTTTTATTAGATTTATTTGCATTTAAAGCTTATCCTGGAGTATTTGATTTAATA
AGAAAAGATGTTAAAAGTACTTTCTTTGAATCTAATAGAGAAATTTTTGACAAAATTTATAAATTAAATAAGCAAAAAAG
AATAATTAATTTTTTAAACGAAAATTCATTAGATCATCAGACTTTTAACGAGAGAATATCATTACTATTAGATCCTCAAA
CATGTGGACCCTTGTTGATAAGTTGCAATCCTAAATATGAAAATGTTCTAAAGGATAAATGGTACAAGGTTGGAGAAGTT
TTAAAAATGTAA

Upstream 100 bases:

>100_bases
GTACTCTATTTGATCCATTGAATAAAATCCACTTCCACCAATCACTCCTAATCTTGATTTTTCAATTGGTAATAAATGTT
CTTTATTCATAGTGATGTAA

Downstream 100 bases:

>100_bases
TTAATTTCTATTGAATTTGTCAATTTCTAAATATCTTAATCTTTTGATTTCCTTTCCCATCTCCTTCCCTGGATCCCATC
CTTCTTTTTTTAATGTTTCT

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 723; Mature: 722

Protein sequence:

>723_residues
MTFNHLVLIGGGHSNVSLLKKWLMFPKLMPEIPVSIISRDSHLVYSAIFPSVISKSITIEESLIDIKSLAKNAKVSFIEE
EVKDIDFNLKKIVLGNRPSVNYSKLVLNYGSQTIIPKEFESLVKNRNAFSIKPFLRAYDSILKEDIFDSVNELPFVIVGS
GLAAIEVSYALRKRWGDRPLKLLCDSRKINNTILKSLRNSNIDLVEKLNFDYGKILLCTGNTSPLWANKKLLDSDSHGRI
ITNQNLQIKSFSGIFAVGDCAVVGSAKRPASGVFAVKVVNTLVQNLKKDIEGRSLKKWFPQKIGLQIVNIFPSHHPKAFA
IYRNFVFGPSFLFWILKYKIDLNFIKKFRSKRLIMKSSEKNISLNDCRGCAAKIPQFVLNKSLINSNLSSFASSPEDSVE
IYQNGQDIILQSVDGFPALVSDPWLNAKITTLHACSDLWACGAKLASAQALISLPKVEREFQSYLFSQSLQGIKSTVEDH
GGELLGGHTFEARSLVNKPYSLGIDISLTVQGILKNGAKPWLKSGMNIGDILMMSRPLGVGIYFAGQMQNINMLGSSSEI
INNLLKSQQYLIDEIYLFQNQFKESLVNAATDITGYGFIGHLKEMVESSNLYRQNNHLEPLKVLLDLFAFKAYPGVFDLI
RKDVKSTFFESNREIFDKIYKLNKQKRIINFLNENSLDHQTFNERISLLLDPQTCGPLLISCNPKYENVLKDKWYKVGEV
LKM

Sequences:

>Translated_723_residues
MTFNHLVLIGGGHSNVSLLKKWLMFPKLMPEIPVSIISRDSHLVYSAIFPSVISKSITIEESLIDIKSLAKNAKVSFIEE
EVKDIDFNLKKIVLGNRPSVNYSKLVLNYGSQTIIPKEFESLVKNRNAFSIKPFLRAYDSILKEDIFDSVNELPFVIVGS
GLAAIEVSYALRKRWGDRPLKLLCDSRKINNTILKSLRNSNIDLVEKLNFDYGKILLCTGNTSPLWANKKLLDSDSHGRI
ITNQNLQIKSFSGIFAVGDCAVVGSAKRPASGVFAVKVVNTLVQNLKKDIEGRSLKKWFPQKIGLQIVNIFPSHHPKAFA
IYRNFVFGPSFLFWILKYKIDLNFIKKFRSKRLIMKSSEKNISLNDCRGCAAKIPQFVLNKSLINSNLSSFASSPEDSVE
IYQNGQDIILQSVDGFPALVSDPWLNAKITTLHACSDLWACGAKLASAQALISLPKVEREFQSYLFSQSLQGIKSTVEDH
GGELLGGHTFEARSLVNKPYSLGIDISLTVQGILKNGAKPWLKSGMNIGDILMMSRPLGVGIYFAGQMQNINMLGSSSEI
INNLLKSQQYLIDEIYLFQNQFKESLVNAATDITGYGFIGHLKEMVESSNLYRQNNHLEPLKVLLDLFAFKAYPGVFDLI
RKDVKSTFFESNREIFDKIYKLNKQKRIINFLNENSLDHQTFNERISLLLDPQTCGPLLISCNPKYENVLKDKWYKVGEV
LKM
>Mature_722_residues
TFNHLVLIGGGHSNVSLLKKWLMFPKLMPEIPVSIISRDSHLVYSAIFPSVISKSITIEESLIDIKSLAKNAKVSFIEEE
VKDIDFNLKKIVLGNRPSVNYSKLVLNYGSQTIIPKEFESLVKNRNAFSIKPFLRAYDSILKEDIFDSVNELPFVIVGSG
LAAIEVSYALRKRWGDRPLKLLCDSRKINNTILKSLRNSNIDLVEKLNFDYGKILLCTGNTSPLWANKKLLDSDSHGRII
TNQNLQIKSFSGIFAVGDCAVVGSAKRPASGVFAVKVVNTLVQNLKKDIEGRSLKKWFPQKIGLQIVNIFPSHHPKAFAI
YRNFVFGPSFLFWILKYKIDLNFIKKFRSKRLIMKSSEKNISLNDCRGCAAKIPQFVLNKSLINSNLSSFASSPEDSVEI
YQNGQDIILQSVDGFPALVSDPWLNAKITTLHACSDLWACGAKLASAQALISLPKVEREFQSYLFSQSLQGIKSTVEDHG
GELLGGHTFEARSLVNKPYSLGIDISLTVQGILKNGAKPWLKSGMNIGDILMMSRPLGVGIYFAGQMQNINMLGSSSEII
NNLLKSQQYLIDEIYLFQNQFKESLVNAATDITGYGFIGHLKEMVESSNLYRQNNHLEPLKVLLDLFAFKAYPGVFDLIR
KDVKSTFFESNREIFDKIYKLNKQKRIINFLNENSLDHQTFNERISLLLDPQTCGPLLISCNPKYENVLKDKWYKVGEVL
KM

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788062, Length=364, Percent_Identity=23.9010989010989, Blast_Score=83, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 81397; Mature: 81265

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNHLVLIGGGHSNVSLLKKWLMFPKLMPEIPVSIISRDSHLVYSAIFPSVISKSITIE
CCCCEEEEEECCCCCHHHHHHHHHHHHHCHHCCHHHHCCCCCHHHHHHHHHHHHCCCCHH
ESLIDIKSLAKNAKVSFIEEEVKDIDFNLKKIVLGNRPSVNYSKLVLNYGSQTIIPKEFE
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHEEECCCCCCCHHHHH
SLVKNRNAFSIKPFLRAYDSILKEDIFDSVNELPFVIVGSGLAAIEVSYALRKRWGDRPL
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCH
KLLCDSRKINNTILKSLRNSNIDLVEKLNFDYGKILLCTGNTSPLWANKKLLDSDSHGRI
HHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
ITNQNLQIKSFSGIFAVGDCAVVGSAKRPASGVFAVKVVNTLVQNLKKDIEGRSLKKWFP
EECCCEEEEECCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCC
QKIGLQIVNIFPSHHPKAFAIYRNFVFGPSFLFWILKYKIDLNFIKKFRSKRLIMKSSEK
HHHCEEEEEECCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NISLNDCRGCAAKIPQFVLNKSLINSNLSSFASSPEDSVEIYQNGQDIILQSVDGFPALV
CCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCHH
SDPWLNAKITTLHACSDLWACGAKLASAQALISLPKVEREFQSYLFSQSLQGIKSTVEDH
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGELLGGHTFEARSLVNKPYSLGIDISLTVQGILKNGAKPWLKSGMNIGDILMMSRPLGV
CCCEECCCCHHHHHHHCCCCEECCEEEEEHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCE
GIYFAGQMQNINMLGSSSEIINNLLKSQQYLIDEIYLFQNQFKESLVNAATDITGYGFIG
EEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HLKEMVESSNLYRQNNHLEPLKVLLDLFAFKAYPGVFDLIRKDVKSTFFESNREIFDKIY
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
KLNKQKRIINFLNENSLDHQTFNERISLLLDPQTCGPLLISCNPKYENVLKDKWYKVGEV
HHCHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHH
LKM
HCC
>Mature Secondary Structure 
TFNHLVLIGGGHSNVSLLKKWLMFPKLMPEIPVSIISRDSHLVYSAIFPSVISKSITIE
CCCEEEEEECCCCCHHHHHHHHHHHHHCHHCCHHHHCCCCCHHHHHHHHHHHHCCCCHH
ESLIDIKSLAKNAKVSFIEEEVKDIDFNLKKIVLGNRPSVNYSKLVLNYGSQTIIPKEFE
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHEEECCCCCCCHHHHH
SLVKNRNAFSIKPFLRAYDSILKEDIFDSVNELPFVIVGSGLAAIEVSYALRKRWGDRPL
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCH
KLLCDSRKINNTILKSLRNSNIDLVEKLNFDYGKILLCTGNTSPLWANKKLLDSDSHGRI
HHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
ITNQNLQIKSFSGIFAVGDCAVVGSAKRPASGVFAVKVVNTLVQNLKKDIEGRSLKKWFP
EECCCEEEEECCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCC
QKIGLQIVNIFPSHHPKAFAIYRNFVFGPSFLFWILKYKIDLNFIKKFRSKRLIMKSSEK
HHHCEEEEEECCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NISLNDCRGCAAKIPQFVLNKSLINSNLSSFASSPEDSVEIYQNGQDIILQSVDGFPALV
CCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCHH
SDPWLNAKITTLHACSDLWACGAKLASAQALISLPKVEREFQSYLFSQSLQGIKSTVEDH
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGELLGGHTFEARSLVNKPYSLGIDISLTVQGILKNGAKPWLKSGMNIGDILMMSRPLGV
CCCEECCCCHHHHHHHCCCCEECCEEEEEHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCE
GIYFAGQMQNINMLGSSSEIINNLLKSQQYLIDEIYLFQNQFKESLVNAATDITGYGFIG
EEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HLKEMVESSNLYRQNNHLEPLKVLLDLFAFKAYPGVFDLIRKDVKSTFFESNREIFDKIY
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
KLNKQKRIINFLNENSLDHQTFNERISLLLDPQTCGPLLISCNPKYENVLKDKWYKVGEV
HHCHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHH
LKM
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA